Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1867 |
Symbol | |
ID | 3716381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2129675 |
End bp | 2131117 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
Protein accession | YP_347599 |
Protein GI | 77458094 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0456814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCTC TGCTCACCGA TCATCCGTTG TTTTGTGCCC TGATCCTGAT CCTGGTCGAT CTCGGTCTGT GGCGCCTGAT CAGCGCCCAC GGCAGTGCAT GGAAACTGTT GGTGCGGGTG CTGATTTTTG CCCTGTTCAG CATTCTGCTG TTCAACGAAG GGCTCAACCC GATGGAGCCT GCGCCTTGGG CCGACAATGT GCCGTTGCAC CTGGCGGCGA CCGGGTTGCA GATCGGCTGG TGGCTGTTCG GCGCGCGCAC TCTGACGGTG CTGATTGGTG CGGTGATGAT GCAGCGTGTC GGGCATACCG GGCGGTTGTT GCAGGATCTG CTCGGTGCGG TGATCTTCCT GATTGCGATC ATCGCGGCGC TGGCCTACGT GCTGGATCTG CCGGTCAAAG GCGTGCTGGC AACGTCCGGG GCGTTGGCGA TCATCGTCGG TCTGGCGCTG CAGAGCACCT TGAGTGACGT GTTTTCCGGG ATCGTGCTCA ACACCACCAA GCCTTATCAA CTGGATGACT GGATCTCCAT CGACGGCACC GAAGGCCGGG TCACCGACAT CGACTGGCGC GCCACGCGCC TGCAAACCAG TCAGGGCAGC ATGGCGGTGA TTCCCAACTC GCTGGCGGCC AAGGCCAAGA TCATCAACTT CAGCCGGCCG AGCAACATGT TCGGGGTTGC CGTCAGCGTG CAGGTCAGCC CCCATGCGCG GCCGAGTTCG GTGATCGATG CCCTGGAGCG CGCGATGCAG GGCTGTCGCC AACTGCTGGA GAACCCCGCG CCGAGTGTTG CGCTGAAGAG CTCCAGCAGT GCAGGCACCG AATATGAAAT CAGCGGGTTC GTCGCCTCGA TGAGTGAAAA GCGCGTGGTG CGCAATCAGC TGTTCGACCT GGCCTACCGG CATCTGCAAG CGTCCGGGGT CAATCTGCTC TCGAGTGATG AGCCGGGTGT TCCGAGCAAT CTCTCGCGAC CTCGGGCGTT GCTCGACAGC TCGCCGATTT TCTCCACCCT GCGTCAGGAG GAGAAAGAAA CCTTCAGCCA GAACATGACT CTGCAAACCT TCCGTGCCGG CGAGATGATT CTGGCGGGCG GGGAGGTCAG CGATCACCTG TTCATCATTG AGTCCGGCGT GGTCTCGGTG ACGCTCAAGC GCCACGGCAC GCCGTTCGAG TCCGGACGGA TGGGGCCGGG CGAAGTGATC GGCGAGGCGG GGATTGTGTC CGATACCTCT TTGCCGGCCG ACTTCTCCGC CAAGACCTTC TGCGCGCTGT ACCGCATCGA GAAGTCTTAT CTCAAGCCAT GCCTGGACGC CCGTCACGAC ATCAACGATG CGATGAAGGC GCTGCTCGAT TTCCGCCTGC ACAAGGCGCA ATCCCTGACG GAAGATACGC CGGCGGTCGT GCCGAAAAAA GGCTTCCTTC AATGGCTGCG CAATCGCGTG TAA
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Protein sequence | MLSLLTDHPL FCALILILVD LGLWRLISAH GSAWKLLVRV LIFALFSILL FNEGLNPMEP APWADNVPLH LAATGLQIGW WLFGARTLTV LIGAVMMQRV GHTGRLLQDL LGAVIFLIAI IAALAYVLDL PVKGVLATSG ALAIIVGLAL QSTLSDVFSG IVLNTTKPYQ LDDWISIDGT EGRVTDIDWR ATRLQTSQGS MAVIPNSLAA KAKIINFSRP SNMFGVAVSV QVSPHARPSS VIDALERAMQ GCRQLLENPA PSVALKSSSS AGTEYEISGF VASMSEKRVV RNQLFDLAYR HLQASGVNLL SSDEPGVPSN LSRPRALLDS SPIFSTLRQE EKETFSQNMT LQTFRAGEMI LAGGEVSDHL FIIESGVVSV TLKRHGTPFE SGRMGPGEVI GEAGIVSDTS LPADFSAKTF CALYRIEKSY LKPCLDARHD INDAMKALLD FRLHKAQSLT EDTPAVVPKK GFLQWLRNRV
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