Gene Pfl01_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1853 
Symbol 
ID3716367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2109176 
End bp2110546 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content61% 
IMG OID 
Productpeptidase M19, renal dipeptidase 
Protein accessionYP_347585 
Protein GI77458080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.46762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC CACGTTCGAA AAAGGCTCTT TTCATTGGCC TGCCACTGGC CCTGGCGATC 
AGTGCCGCAG CAGGCTTCGC AGCCTGGGAT TACTGGCTCA ACGACAATCC CGGCTATCCG
GTCAAGGTGA TGGACCAGGC CCGCGAGATG CACCAGCACC TGCTGTCCTT CGACAGCCAC
ATCACCGTCC TTCAGGACTT CGGCACCCAC GGCAATGAAG CCGACAAGGA CGGCCCCGGT
CAGTTCGACC TGATAAAAGC CAATCGCGGG CAACTGTCCG GTGCAGCACT GACGATTTTC
GGCTGGCCGG AACTGTGGAA CGGCGCCAAT GCGCCGCACA AGCCTACGGC GGGTTTCGTT
GAAGAGGCAC GCAACCAGCA GGAGATCCGC TACAAGATCA TCTCCGGGAT GGTCCGCGAC
TTCCCCAATC AGGTCGGGAT TGCCTACACG CCCGAAGATT TTCGGCGCCT GCACGGTGAA
GGCAAGTTCG CGATCTTCAT CAGCATGCTC AACGCCTACC CGCTGGGCCA CGACCTGAAC
CTGCTGGACC TGTGGACGGC GCGTGGCATG CGCATGTTCG GTTTCAGCTA CATCGGCAAC
AACGATTGGG CCGACTCATC CCGGCCGCTG CCGTTCTTCA ATGATTCGCC GGATGCACTC
GACGGCCTCT CCGACCTCGG CAAACAAGCG GTCAAGCGTC TCAACGATTT GGGCGTGATC
ATCGATGTGT CACAGATGTC GACCAAAGCC CTGGAGCAAG TCGCGCAACT GAGCCGCACG
CCGATGGTGG CCTCGCACTC GGCGCCACGG GCGATGGTCG ACATCCCCCG CAACCTCAGC
GACAAAGAAC TGCAACTGAT CAAGAACAGC GGCGGCGTGG TGCAGGTGGT GGGCTTCTCG
CAGTACCTGC GCCCGCTGAC CCAGACCACC CAGGACAAGC TCAACGAACT GCGCAAAAGC
TTTGACCTGC CGCCACTGCC CAACCTCGCC GTGGCACTGA TGCCGGGCGA CCCGATCATC
GCCGCATGGC CCGAGGCCAA GTTCGGCCAG TACGCCAGCC GCCTCTACGC GATCCTCGAC
GAAGAACCCA AAGCCACGCT CAAGGACTAC GGCGACGCCA TCGATTACAC CGTGCGCAAG
ATCGGTATCG ACCACGTCGG CATCAGCTCC GACTTCAACG AAGGCGGCGG CGTCAAAGGC
TGGGAGAACG TCGGCGACAT CCCCAACGTC ACCGCCGAAC TGATTTCGCG CGGCTACTCC
GAAGCAGACA TCGCCAAGCT CTGGGGCGGC AACTTCCTGC GGGTCTGGGA TCAGGTGCAG
AAAGCCGCCC GACCTGCGCT GATTTCACAG CAGGACAAGA TCAAGCCATG A
 
Protein sequence
MTKPRSKKAL FIGLPLALAI SAAAGFAAWD YWLNDNPGYP VKVMDQAREM HQHLLSFDSH 
ITVLQDFGTH GNEADKDGPG QFDLIKANRG QLSGAALTIF GWPELWNGAN APHKPTAGFV
EEARNQQEIR YKIISGMVRD FPNQVGIAYT PEDFRRLHGE GKFAIFISML NAYPLGHDLN
LLDLWTARGM RMFGFSYIGN NDWADSSRPL PFFNDSPDAL DGLSDLGKQA VKRLNDLGVI
IDVSQMSTKA LEQVAQLSRT PMVASHSAPR AMVDIPRNLS DKELQLIKNS GGVVQVVGFS
QYLRPLTQTT QDKLNELRKS FDLPPLPNLA VALMPGDPII AAWPEAKFGQ YASRLYAILD
EEPKATLKDY GDAIDYTVRK IGIDHVGISS DFNEGGGVKG WENVGDIPNV TAELISRGYS
EADIAKLWGG NFLRVWDQVQ KAARPALISQ QDKIKP