Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1830 |
Symbol | |
ID | 3716383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2046259 |
End bp | 2049126 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347562 |
Protein GI | 77458057 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGT ACCTTTTAAG TTTTGCAAGG CAGAATCTTG AGGGGCGCAC TGATGCTTAC CTGGTGCTTC TCTGGTGTAT GTACCAGGCT AACCAAAGCA AGGGCCGCTA CTCAGACCAC ATCAAATCAC ACATCACCAC GGCGTCGGAT CAGCTGCTGG GTCGCAACTA CCAACGTGTC GCTGCTCGCT TCAAGAAAGT GCTCGATAAA AGGCCTGAAC TAGATCGAAT ACCACCTTCG GGCTTGGGGG CGTTGGATTA CCTTCGCGTC AAGAATTTCC GTGGCTTTGG GGAGTTTGGC GCCGACGATA AAGGCACGTT CATTCGATTC AGTAAGCTGA AAAACATTTT CTACGCGCCC AATGGTGGCG GTAAATCATC GCTCTGCGAA GCCATCGAAA TTTGCACCAC TGGGGACATC AAGGAAGCCG CTAGGCGCAA GACCAAGGTC AAGCAGTACA TTGCACGTGG AGAAACCAAG CCTCAGCTCG CTCTCTTGGG AACGAATAAG CTCAAAATTA CGCCCAGCAT CAGTTGGTCG AGCTGTTTCA TTGATCGCAA TCGCCTTCAG GAGTTTTCGC TCCTGGGCTC CAAGGACACA GGCAGTGGCG AAAGTGATGT CTTGGCCACC TTGTTCGGAT TGGAAGAGCT CCAAGAAGTC ATTTCTCGTT TCGTCCGCCC TGAAAGCTTT ACGCTCAAAA CATTTATGCG TGCCGACCAG GCGGAGGCGC TGCTGAACCT TGAACGCGCT CGAACAGAAC TAGGTCAACA GCGGCGCAAG CACAGGGCAG ATCTTCAAGT TGCGATTTCG GAAACCTGTC AGCTATTGGG ACTGCGGTCT GATCAGGATT TCGAAATTCG TCCAAAGGTA CAGCGGCTCC GCAAAAAGAT AGACATGCAT ATCCGTGGGG CCGAGCGACT GCGAGCAGCC AAGGCACCAG TGGTCATTCC TGTGAAACGT GTTGCACGTA CTTCTGCCAT CGCCAAGCGG TTGCTCAACC GCAGAACTCA GATCGAAACA CTTTTTCTGC AAAGGGCCAG TGAAGTTAAC TATCGCGCTG TTTTTGAAGC CTTGGAAGCC ATGGAACAAC AGTCTGAGCA GACCTGTCCT GCATGTTTGA CGCCACTTGA TCAGGTCACG GTGAACCCCT TTGAAAGGGC TCGCGATCAG ATCAAAGCGC TCGGAGCCTT GGAGGCTCTG AAGCAATCCA AGCTGAGAAA TGATGCTCAA GTTGTCTTGT GGGCTTCCAG GATCGCTACT GGTATCAGTT CCGTGAAGGG TAATACCTAC GCTGATGTAC CCTGCTCACT GGCGATGGAC GCGTTGGAAG CGGTGCTCGC AGAATTCCAT ACGGCCACTG ATCGCTCGAC AGTGGCAGCG TCTGTCCTCA ATGCTTTCAT CGCGCTCTGT GCTGACAGTA CAGCCCAGAT CGAGGCCTAT CTGCTCGCCT GCGAGCGTAA GCGGCGAGAG GTTGACCAGG CAGAAGTTCA AGCGGCCCGT CTCAATGAGC TCATCGAACA CCTCAAGAAG GTAGATGAGT CGCTGAAGCG ACAGTTCGAC ATCAAAACCC GTGCAGAAAC CGAGTTCAAA AACGCCAATA ACAGAATGCT TGCCTTGATG GGGCAGAGAA CGGTTTTGCT CAACGATTCT GTGGATAACA GTCACTTCAA CCAATTGCTC AAGGATCTTG AGGTTGAATA CCGAACGCTG TATGGCGACC TGCTGGATTA CAAGCTAGAG CTCGAAAAAG CGCGCATTAC AGGGATCGAA GCCAAGGCTG CCGAGTACTA CCGAGCGATC AATAACCATG ACGATGACCA TGAGCAGATA GAGACGCTGA ACTTTGAAAA GCTCTCGGAG AGCTACCGGA TCAAGATCAA CAACGTGGAC GGATCTCTTC TGGATGCATT TGCTGTGCTC AGCGAGGGGC ATCTGAGGGC ATTGGGCTTA TCGATTCTTC TGGCGATGGC TGAGAAAAAC AATTTTCCGC TAATCGTCTT TGATGACGTC GTCAATGCGA TCGACACGGA TCACCGATCC AACATCATTG ATCTGTTTTT CAATGACACT TACCTGCGTC GGATCCAGAT GGTGGTAACC ACCCATGATC GCCTCTTCTG GGAGCGCTTC TGCATCATCG CTGACCGTCA TCCTCAATGC GACCAGCACG CAAACCATGT GCTCAGCTAC ACGAACAAAG GCATCGTGGT GATTGATCAC GCAGGCGGTT TCCAGAAAAA GGTGCACATG GCGTTGTCGG TCTTCGACGT TCGGCAAGCG TTGCTGTATT GCCGGATCTG GTTCGAGTCC ATGGTGCTGG AGTTCTGCAT TGAAAACGGC GTCCAGGTCA CCGCGAACTT CAACAAATCT CAGCTCAAGA AGAGTATGTA CCTGCAGGTG AGCCTGGAGC ACACCTTCAA GCTAGTGGAG CCCTTCATTG ACTACGACCT ATCGTATTTC AATTTTATCA AGAATGATCT GGTGAACTGG GGTGGCCAAA ATCAAGAACA TCATGCATTT GATGAAGAAA GCCTGAACTT TGTGCACTCC AAGACCAGTG GTGAGGTTTC GAGAATCTAC GACGCGATCC GTTTTCTGGA ATGTCAGCTT TTCATGGACA AAAAGAAGGA GTCCGGAGAA AGGTACCTTG CAGAGGTGAA TGAGAAAGTC GAGAAGGGCC GCAGGAAATT AGCAGGACTC GCCAGAGCAC CTGAAGAGGT GCAGAAAGAA CATCAGGCAG GGTTGAAGGC GTTGGAAAAG CGCGCCCTTG AGCTCACCCA TGAGCTTCAG TTCATCGAGC GCTGTGTAGT GAGCATGGCT GACCGCGAGC GAGCCGGGGA GCTGCCCGCT GAGTTGCCGC CTGCCTAG
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Protein sequence | MSQYLLSFAR QNLEGRTDAY LVLLWCMYQA NQSKGRYSDH IKSHITTASD QLLGRNYQRV AARFKKVLDK RPELDRIPPS GLGALDYLRV KNFRGFGEFG ADDKGTFIRF SKLKNIFYAP NGGGKSSLCE AIEICTTGDI KEAARRKTKV KQYIARGETK PQLALLGTNK LKITPSISWS SCFIDRNRLQ EFSLLGSKDT GSGESDVLAT LFGLEELQEV ISRFVRPESF TLKTFMRADQ AEALLNLERA RTELGQQRRK HRADLQVAIS ETCQLLGLRS DQDFEIRPKV QRLRKKIDMH IRGAERLRAA KAPVVIPVKR VARTSAIAKR LLNRRTQIET LFLQRASEVN YRAVFEALEA MEQQSEQTCP ACLTPLDQVT VNPFERARDQ IKALGALEAL KQSKLRNDAQ VVLWASRIAT GISSVKGNTY ADVPCSLAMD ALEAVLAEFH TATDRSTVAA SVLNAFIALC ADSTAQIEAY LLACERKRRE VDQAEVQAAR LNELIEHLKK VDESLKRQFD IKTRAETEFK NANNRMLALM GQRTVLLNDS VDNSHFNQLL KDLEVEYRTL YGDLLDYKLE LEKARITGIE AKAAEYYRAI NNHDDDHEQI ETLNFEKLSE SYRIKINNVD GSLLDAFAVL SEGHLRALGL SILLAMAEKN NFPLIVFDDV VNAIDTDHRS NIIDLFFNDT YLRRIQMVVT THDRLFWERF CIIADRHPQC DQHANHVLSY TNKGIVVIDH AGGFQKKVHM ALSVFDVRQA LLYCRIWFES MVLEFCIENG VQVTANFNKS QLKKSMYLQV SLEHTFKLVE PFIDYDLSYF NFIKNDLVNW GGQNQEHHAF DEESLNFVHS KTSGEVSRIY DAIRFLECQL FMDKKKESGE RYLAEVNEKV EKGRRKLAGL ARAPEEVQKE HQAGLKALEK RALELTHELQ FIERCVVSMA DRERAGELPA ELPPA
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