Gene Pfl01_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1827 
Symbol 
ID3716433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2039457 
End bp2040881 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content61% 
IMG OID 
Productcbb3-type cytochrome c oxidase subunit I 
Protein accessionYP_347559 
Protein GI77458054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTT CTATCAGTAC CGCCTACAAC TACAAGGTGG TCCGCCAATT CGCCATTATG 
ACGGTGGTGT GGGGCATCGT CGGCATGGGG CTCGGGGTTT TTCTCGCGGC TCAATTGGTC
TGGCCCGAAC TCAACTTCAA CCTGCCGTGG ACCAGCTTCG GACGCCTGCG CCCGCTGCAC
ACCAACGCGG TGATCTTCGC GTTCGGCGGC TGTGCCTTGT TCGCCAGTTC GTTCTACTCG
GTGCAGCGCA CCTGCCAGAC CCAGCTGTTT GCGCCGAAAA TCGCCGCCTT CTGCTTCTGG
GGCTGGCAAC TGGTGATCCT GCTGGCGGCC ATCAGCCTGC CACTGGGTTA CACCAGCTCC
AAGGAATACG CCGAACTGGA ATGGCCGATC GACATTCTGA TCACCATCGT CTGGGTCGCC
TACGCCATCG TGTTCTTCGG CACGATCATG CAGCGCAAGA CCAAACACAT TTATGTGGGC
AACTGGTTCT TCGGCGCGTT CATCATCACC GTGGCGATCC TGCACATCGT CAACAACCTT
GAGTTGCCGG TGAGTTTCAC CAAGTCCTAC TCGGTGTATG CCGGTGCAAC CGACGCGATG
GTGCAATGGT GGTACGGCCA CAACGCCGTA GGCTTTTTCC TCACCGCCGG TTTCCTCGGG
ATGATGTACT ACTTCGTGCC GAAACAGGCC GAACGTCCGG TGTATTCGTA TCGTCTGTCG
ATCGTGCACT TCTGGGCGCT GATCACCCTG TACATCTGGG CCGGCCCGCA CCATTTGCAC
TACACCGCGC TGCCGGACTG GGCGCAGTCG CTGGGCATGG TGATGTCGCT GGTACTGCTG
GCACCGAGCT GGGGCGGCAT GATCAACGGC ATGATGACCC TCTCGGGCGC CTGGCATAAG
TTGCGCAGCG ACCCGATCCT GCGCTTCCTG GTGGTGTCGC TGGCGTTCTA CGGCATGTCG
ACCTTCGAAG GTCCGATGAT GGCGATCAAG ACTGTCAACG CCCTCTCCCA CTACACCGAC
TGGACCATCG GCCACGTACA CGCCGGCGCG CTCGGCTGGG TGGCGATGAT TTCCATCGGC
GCGCTGTATC ACATGATCCC GAAAGTCTTC GGCAAAGAGC AGATGCACAG CATCGGCCTG
ATCAATGCGC ACTTCTGGCT CGCGACCATC GGCACCGTGC TCTACATCGC CTCGATGTGG
GTCAACGGCA TCGCCCAGGG CCTGATGTGG CGTGCGGTGA ACGAGGACGG CACGCTGACC
TACTCCTTCG TCGAAACCCT GGTGGCCAGC CACCCTGGCT TCGTCGTGCG GCTGATCGGC
GGTGCGATCT TCCTCAGCGG CATGTTCCTG ATGGCTTACA ACACCTGGCG CACCGTGCGG
GCCTCGCAGC CTGCTGACGT CGTTGCTGCC GCGCAGATGG CCTGA
 
Protein sequence
MNTSISTAYN YKVVRQFAIM TVVWGIVGMG LGVFLAAQLV WPELNFNLPW TSFGRLRPLH 
TNAVIFAFGG CALFASSFYS VQRTCQTQLF APKIAAFCFW GWQLVILLAA ISLPLGYTSS
KEYAELEWPI DILITIVWVA YAIVFFGTIM QRKTKHIYVG NWFFGAFIIT VAILHIVNNL
ELPVSFTKSY SVYAGATDAM VQWWYGHNAV GFFLTAGFLG MMYYFVPKQA ERPVYSYRLS
IVHFWALITL YIWAGPHHLH YTALPDWAQS LGMVMSLVLL APSWGGMING MMTLSGAWHK
LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMISIG
ALYHMIPKVF GKEQMHSIGL INAHFWLATI GTVLYIASMW VNGIAQGLMW RAVNEDGTLT
YSFVETLVAS HPGFVVRLIG GAIFLSGMFL MAYNTWRTVR ASQPADVVAA AQMA