Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1827 |
Symbol | |
ID | 3716433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2039457 |
End bp | 2040881 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_347559 |
Protein GI | 77458054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTT CTATCAGTAC CGCCTACAAC TACAAGGTGG TCCGCCAATT CGCCATTATG ACGGTGGTGT GGGGCATCGT CGGCATGGGG CTCGGGGTTT TTCTCGCGGC TCAATTGGTC TGGCCCGAAC TCAACTTCAA CCTGCCGTGG ACCAGCTTCG GACGCCTGCG CCCGCTGCAC ACCAACGCGG TGATCTTCGC GTTCGGCGGC TGTGCCTTGT TCGCCAGTTC GTTCTACTCG GTGCAGCGCA CCTGCCAGAC CCAGCTGTTT GCGCCGAAAA TCGCCGCCTT CTGCTTCTGG GGCTGGCAAC TGGTGATCCT GCTGGCGGCC ATCAGCCTGC CACTGGGTTA CACCAGCTCC AAGGAATACG CCGAACTGGA ATGGCCGATC GACATTCTGA TCACCATCGT CTGGGTCGCC TACGCCATCG TGTTCTTCGG CACGATCATG CAGCGCAAGA CCAAACACAT TTATGTGGGC AACTGGTTCT TCGGCGCGTT CATCATCACC GTGGCGATCC TGCACATCGT CAACAACCTT GAGTTGCCGG TGAGTTTCAC CAAGTCCTAC TCGGTGTATG CCGGTGCAAC CGACGCGATG GTGCAATGGT GGTACGGCCA CAACGCCGTA GGCTTTTTCC TCACCGCCGG TTTCCTCGGG ATGATGTACT ACTTCGTGCC GAAACAGGCC GAACGTCCGG TGTATTCGTA TCGTCTGTCG ATCGTGCACT TCTGGGCGCT GATCACCCTG TACATCTGGG CCGGCCCGCA CCATTTGCAC TACACCGCGC TGCCGGACTG GGCGCAGTCG CTGGGCATGG TGATGTCGCT GGTACTGCTG GCACCGAGCT GGGGCGGCAT GATCAACGGC ATGATGACCC TCTCGGGCGC CTGGCATAAG TTGCGCAGCG ACCCGATCCT GCGCTTCCTG GTGGTGTCGC TGGCGTTCTA CGGCATGTCG ACCTTCGAAG GTCCGATGAT GGCGATCAAG ACTGTCAACG CCCTCTCCCA CTACACCGAC TGGACCATCG GCCACGTACA CGCCGGCGCG CTCGGCTGGG TGGCGATGAT TTCCATCGGC GCGCTGTATC ACATGATCCC GAAAGTCTTC GGCAAAGAGC AGATGCACAG CATCGGCCTG ATCAATGCGC ACTTCTGGCT CGCGACCATC GGCACCGTGC TCTACATCGC CTCGATGTGG GTCAACGGCA TCGCCCAGGG CCTGATGTGG CGTGCGGTGA ACGAGGACGG CACGCTGACC TACTCCTTCG TCGAAACCCT GGTGGCCAGC CACCCTGGCT TCGTCGTGCG GCTGATCGGC GGTGCGATCT TCCTCAGCGG CATGTTCCTG ATGGCTTACA ACACCTGGCG CACCGTGCGG GCCTCGCAGC CTGCTGACGT CGTTGCTGCC GCGCAGATGG CCTGA
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Protein sequence | MNTSISTAYN YKVVRQFAIM TVVWGIVGMG LGVFLAAQLV WPELNFNLPW TSFGRLRPLH TNAVIFAFGG CALFASSFYS VQRTCQTQLF APKIAAFCFW GWQLVILLAA ISLPLGYTSS KEYAELEWPI DILITIVWVA YAIVFFGTIM QRKTKHIYVG NWFFGAFIIT VAILHIVNNL ELPVSFTKSY SVYAGATDAM VQWWYGHNAV GFFLTAGFLG MMYYFVPKQA ERPVYSYRLS IVHFWALITL YIWAGPHHLH YTALPDWAQS LGMVMSLVLL APSWGGMING MMTLSGAWHK LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMISIG ALYHMIPKVF GKEQMHSIGL INAHFWLATI GTVLYIASMW VNGIAQGLMW RAVNEDGTLT YSFVETLVAS HPGFVVRLIG GAIFLSGMFL MAYNTWRTVR ASQPADVVAA AQMA
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