Gene Pfl01_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1816 
Symbol 
ID3716422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2027475 
End bp2029925 
Gene Length2451 bp 
Protein Length816 aa 
Translation table11 
GC content67% 
IMG OID 
Productcopper-translocating P-type ATPase 
Protein accessionYP_347548 
Protein GI77458043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CGATCCCCTG CTACCACTGC GCCCTGCCCG TCCCGTCCGG CAGCCGCTTC 
ACCGCCGTCG TGCTCGGGGA GTCCCGCGAG TTCTGCTGCC CCGGCTGTCA GGCCGTGGCC
GAAGCCATCG TCGCCGGTGG TCTGGAAAGC TATTACCAGC ATCGCAGCGA AGCCTCGGCC
AACCCCGAAG CGCTGCCGGT GCAACTGGTC GATGAGCTTG AGCTGTACGA CCGCGCCGAT
GTGCAGCAAC CGTTTGTGCG CCACGAAGGT GAACTGGCCG AAACCACGTT GCTGATGGAA
GGCATCAGTT GCGCCGCCTG CGGCTGGCTG ATCGAGAAAC ACCTGCGCAC CCTGCCCGCC
GTGGCCGAGG CGCGGCTGAA CCTGTCCAAT CATCGCCTGC ATGTGCGCTG GGCTGACGCT
CAGCTGCCAC TGAGCCAGAT CCTCGGCGAA CTGCGCCACA TCGGCTACGC CGCGCACCCG
TATCAGGCCG ACCGCGCGAG CGAACAACTG GCCAGCGAAA ACCGTCTCGC CCTGCGCCAA
CTCGGGGTCG CCGGGCTGCT GTGGTTTCAG GCGATGATGG CGACCATGGC GACCTGGCCG
GAATTCAACA TCGACCTCAG CCCGGAGTTG CACACCATCC TGCGCTGGGT CGCGCTGTTC
CTCACCACGC CGATCGTGTT CTACAGCTGC GCGCCGTTTT TCAAAGGGGC CATGCGCGAC
TTGCGCACCC GTCATCTGAC CATGGATGTC TCGGTGTCGC TGGCGATCGG CGCAGCGTAT
GTCGCCGGAA TCTGGACCTC TATTACCGGG GTTGGCGAGC TGTATTTCGA TGCGGTGGGC
ATGTTCGCGC TGTTCCTGCT CGCCGGCCGC TACCTCGAAC GCCGCGCCCG CGAGCGCACC
GCTGCCGCCA CCGCGCAACT GGTCAATCTG CTGCCCGCCT CGTGCCTGCG CCTCGACGAC
GCCGGCCAGA GCGAGCGGAT CCTGCTCAGC GAACTGCGCC TCGGTGACCG GGTACTGGTG
CAGCCCGGTT CGGTGCTGCC GGCGGACGGC AAGATCCTTG ATGGCCAGTC GAGCATCGAC
GAATCGGTGC TGACCGGCGA ATACCTGCCG CAACCGCGTG CCAAGGGCGA TGCCGTCACC
GCTGGCACGC TGAACGTGGA AGGTGCGCTG ACCGTCGAGG TGCAGGCGCT GGGTCAGGAC
ACGCGACTCT CGGCGATCGT CCGCCTGCTG GATCGCGCCC AGGCGGAAAA ACCACGGCTG
GCGGAAATCG CCGACCGCGC CGCGCAATGG TTCCTGTTGC TGTCGTTGAT CGCGGCGGCC
GCCATCGGCT TACTGTGGTG GGAACTGGAT TCGTCACGGG CCTTCTGGAT CGTCCTCGCC
ATGCTGGTGG CGACCTGCCC GTGCGCGCTG TCGCTGGCGA CACCGACCGC CCTCACCGCC
GCCACCGGCA CCCTGCACAA ACTCGGCCTG CTGCTGACCC GCGGCCATGT GCTGGAAGGC
CTGAACCAGA TCGACACGGT GATTTTCGAC AAGACCGGCA CCCTCACCGA GGGGCGTCTG
GTATTGCGCT CGATCCGCCC GCTCGGCGCC CTCGACAACG ATCATTGCCT GAGCCTCGCC
GCCGCCCTGG AAAACCGTTC CGAACACCCG ATTGCCCGCG CCTTCGGCCG CGCGCCGCTG
GCTGCCGAAG ATGTCCACAG CACGCCGGGC CTGGGGCTTG AAGGGTTGGT TGGCGAACAA
CGCTTGCGCA TCGGCCAGGC GGATTTTGTC TGTGATCTCA GCGGCGCGCC GGTGCCATCG
ATGCCGAACG AGCCGGGTCA ATGGCTGCTG CTCGGTAACC GTCAGGGGCC GCTGGCCTGG
TTCGCCCTCG ACGACCGTCT GCGCGACGAC GCCCCGGCCC TGCTCGCGGC GTGCAAGGCG
CGCGGCTGGC GCACGCTGCT GCTGTCGGGC GACAGTTCGC CAATGGTCGC CAGTGTCGCC
GCCGAACTGG GCATCGACGA GGCCCGTGGC GGCTTGCGTC CGGACGACAA GTTGCAAGTG
CTGCAACAAC TGCACAGGAA CGGCCGCAAG GTGTTGATGC TCGGCGACGG GGTCAACGAC
GTGCCGGTAC TGGCCGCTGC GGACATCAGC GTGGCCATGG GTTCGGCCAC CGATCTGGCA
AAAACCAGTG CCGACGCGGT GTTGCTGTCC AACCGTCTCG ACGCCTTGGT ACAAGCCTTC
ACGCTGGCCC GCCGCACTCG CCGGGTGATC ATCGAGAACC TGTTGTGGGC CGCGCTGTAC
AATGGCCTCA TGTTGCCGTT CGCCGCCCTC GGCTGGATCA CTCCGGTGTG GGCCGCCGTC
GGCATGTCGA TCAGTTCGCT GACCGTGGTG CTCAACGCCC TGCGCCTGAC TCGCCTGCCG
AGCGCGCCGG CCGTCAGCGC CACGTCAGAA ACCCGCCCGC TGCCGGCCTG A
 
Protein sequence
MTTPIPCYHC ALPVPSGSRF TAVVLGESRE FCCPGCQAVA EAIVAGGLES YYQHRSEASA 
NPEALPVQLV DELELYDRAD VQQPFVRHEG ELAETTLLME GISCAACGWL IEKHLRTLPA
VAEARLNLSN HRLHVRWADA QLPLSQILGE LRHIGYAAHP YQADRASEQL ASENRLALRQ
LGVAGLLWFQ AMMATMATWP EFNIDLSPEL HTILRWVALF LTTPIVFYSC APFFKGAMRD
LRTRHLTMDV SVSLAIGAAY VAGIWTSITG VGELYFDAVG MFALFLLAGR YLERRARERT
AAATAQLVNL LPASCLRLDD AGQSERILLS ELRLGDRVLV QPGSVLPADG KILDGQSSID
ESVLTGEYLP QPRAKGDAVT AGTLNVEGAL TVEVQALGQD TRLSAIVRLL DRAQAEKPRL
AEIADRAAQW FLLLSLIAAA AIGLLWWELD SSRAFWIVLA MLVATCPCAL SLATPTALTA
ATGTLHKLGL LLTRGHVLEG LNQIDTVIFD KTGTLTEGRL VLRSIRPLGA LDNDHCLSLA
AALENRSEHP IARAFGRAPL AAEDVHSTPG LGLEGLVGEQ RLRIGQADFV CDLSGAPVPS
MPNEPGQWLL LGNRQGPLAW FALDDRLRDD APALLAACKA RGWRTLLLSG DSSPMVASVA
AELGIDEARG GLRPDDKLQV LQQLHRNGRK VLMLGDGVND VPVLAAADIS VAMGSATDLA
KTSADAVLLS NRLDALVQAF TLARRTRRVI IENLLWAALY NGLMLPFAAL GWITPVWAAV
GMSISSLTVV LNALRLTRLP SAPAVSATSE TRPLPA