Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1816 |
Symbol | |
ID | 3716422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2027475 |
End bp | 2029925 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | copper-translocating P-type ATPase |
Protein accession | YP_347548 |
Protein GI | 77458043 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCC CGATCCCCTG CTACCACTGC GCCCTGCCCG TCCCGTCCGG CAGCCGCTTC ACCGCCGTCG TGCTCGGGGA GTCCCGCGAG TTCTGCTGCC CCGGCTGTCA GGCCGTGGCC GAAGCCATCG TCGCCGGTGG TCTGGAAAGC TATTACCAGC ATCGCAGCGA AGCCTCGGCC AACCCCGAAG CGCTGCCGGT GCAACTGGTC GATGAGCTTG AGCTGTACGA CCGCGCCGAT GTGCAGCAAC CGTTTGTGCG CCACGAAGGT GAACTGGCCG AAACCACGTT GCTGATGGAA GGCATCAGTT GCGCCGCCTG CGGCTGGCTG ATCGAGAAAC ACCTGCGCAC CCTGCCCGCC GTGGCCGAGG CGCGGCTGAA CCTGTCCAAT CATCGCCTGC ATGTGCGCTG GGCTGACGCT CAGCTGCCAC TGAGCCAGAT CCTCGGCGAA CTGCGCCACA TCGGCTACGC CGCGCACCCG TATCAGGCCG ACCGCGCGAG CGAACAACTG GCCAGCGAAA ACCGTCTCGC CCTGCGCCAA CTCGGGGTCG CCGGGCTGCT GTGGTTTCAG GCGATGATGG CGACCATGGC GACCTGGCCG GAATTCAACA TCGACCTCAG CCCGGAGTTG CACACCATCC TGCGCTGGGT CGCGCTGTTC CTCACCACGC CGATCGTGTT CTACAGCTGC GCGCCGTTTT TCAAAGGGGC CATGCGCGAC TTGCGCACCC GTCATCTGAC CATGGATGTC TCGGTGTCGC TGGCGATCGG CGCAGCGTAT GTCGCCGGAA TCTGGACCTC TATTACCGGG GTTGGCGAGC TGTATTTCGA TGCGGTGGGC ATGTTCGCGC TGTTCCTGCT CGCCGGCCGC TACCTCGAAC GCCGCGCCCG CGAGCGCACC GCTGCCGCCA CCGCGCAACT GGTCAATCTG CTGCCCGCCT CGTGCCTGCG CCTCGACGAC GCCGGCCAGA GCGAGCGGAT CCTGCTCAGC GAACTGCGCC TCGGTGACCG GGTACTGGTG CAGCCCGGTT CGGTGCTGCC GGCGGACGGC AAGATCCTTG ATGGCCAGTC GAGCATCGAC GAATCGGTGC TGACCGGCGA ATACCTGCCG CAACCGCGTG CCAAGGGCGA TGCCGTCACC GCTGGCACGC TGAACGTGGA AGGTGCGCTG ACCGTCGAGG TGCAGGCGCT GGGTCAGGAC ACGCGACTCT CGGCGATCGT CCGCCTGCTG GATCGCGCCC AGGCGGAAAA ACCACGGCTG GCGGAAATCG CCGACCGCGC CGCGCAATGG TTCCTGTTGC TGTCGTTGAT CGCGGCGGCC GCCATCGGCT TACTGTGGTG GGAACTGGAT TCGTCACGGG CCTTCTGGAT CGTCCTCGCC ATGCTGGTGG CGACCTGCCC GTGCGCGCTG TCGCTGGCGA CACCGACCGC CCTCACCGCC GCCACCGGCA CCCTGCACAA ACTCGGCCTG CTGCTGACCC GCGGCCATGT GCTGGAAGGC CTGAACCAGA TCGACACGGT GATTTTCGAC AAGACCGGCA CCCTCACCGA GGGGCGTCTG GTATTGCGCT CGATCCGCCC GCTCGGCGCC CTCGACAACG ATCATTGCCT GAGCCTCGCC GCCGCCCTGG AAAACCGTTC CGAACACCCG ATTGCCCGCG CCTTCGGCCG CGCGCCGCTG GCTGCCGAAG ATGTCCACAG CACGCCGGGC CTGGGGCTTG AAGGGTTGGT TGGCGAACAA CGCTTGCGCA TCGGCCAGGC GGATTTTGTC TGTGATCTCA GCGGCGCGCC GGTGCCATCG ATGCCGAACG AGCCGGGTCA ATGGCTGCTG CTCGGTAACC GTCAGGGGCC GCTGGCCTGG TTCGCCCTCG ACGACCGTCT GCGCGACGAC GCCCCGGCCC TGCTCGCGGC GTGCAAGGCG CGCGGCTGGC GCACGCTGCT GCTGTCGGGC GACAGTTCGC CAATGGTCGC CAGTGTCGCC GCCGAACTGG GCATCGACGA GGCCCGTGGC GGCTTGCGTC CGGACGACAA GTTGCAAGTG CTGCAACAAC TGCACAGGAA CGGCCGCAAG GTGTTGATGC TCGGCGACGG GGTCAACGAC GTGCCGGTAC TGGCCGCTGC GGACATCAGC GTGGCCATGG GTTCGGCCAC CGATCTGGCA AAAACCAGTG CCGACGCGGT GTTGCTGTCC AACCGTCTCG ACGCCTTGGT ACAAGCCTTC ACGCTGGCCC GCCGCACTCG CCGGGTGATC ATCGAGAACC TGTTGTGGGC CGCGCTGTAC AATGGCCTCA TGTTGCCGTT CGCCGCCCTC GGCTGGATCA CTCCGGTGTG GGCCGCCGTC GGCATGTCGA TCAGTTCGCT GACCGTGGTG CTCAACGCCC TGCGCCTGAC TCGCCTGCCG AGCGCGCCGG CCGTCAGCGC CACGTCAGAA ACCCGCCCGC TGCCGGCCTG A
|
Protein sequence | MTTPIPCYHC ALPVPSGSRF TAVVLGESRE FCCPGCQAVA EAIVAGGLES YYQHRSEASA NPEALPVQLV DELELYDRAD VQQPFVRHEG ELAETTLLME GISCAACGWL IEKHLRTLPA VAEARLNLSN HRLHVRWADA QLPLSQILGE LRHIGYAAHP YQADRASEQL ASENRLALRQ LGVAGLLWFQ AMMATMATWP EFNIDLSPEL HTILRWVALF LTTPIVFYSC APFFKGAMRD LRTRHLTMDV SVSLAIGAAY VAGIWTSITG VGELYFDAVG MFALFLLAGR YLERRARERT AAATAQLVNL LPASCLRLDD AGQSERILLS ELRLGDRVLV QPGSVLPADG KILDGQSSID ESVLTGEYLP QPRAKGDAVT AGTLNVEGAL TVEVQALGQD TRLSAIVRLL DRAQAEKPRL AEIADRAAQW FLLLSLIAAA AIGLLWWELD SSRAFWIVLA MLVATCPCAL SLATPTALTA ATGTLHKLGL LLTRGHVLEG LNQIDTVIFD KTGTLTEGRL VLRSIRPLGA LDNDHCLSLA AALENRSEHP IARAFGRAPL AAEDVHSTPG LGLEGLVGEQ RLRIGQADFV CDLSGAPVPS MPNEPGQWLL LGNRQGPLAW FALDDRLRDD APALLAACKA RGWRTLLLSG DSSPMVASVA AELGIDEARG GLRPDDKLQV LQQLHRNGRK VLMLGDGVND VPVLAAADIS VAMGSATDLA KTSADAVLLS NRLDALVQAF TLARRTRRVI IENLLWAALY NGLMLPFAAL GWITPVWAAV GMSISSLTVV LNALRLTRLP SAPAVSATSE TRPLPA
|
| |