Gene Pfl01_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1805 
Symbol 
ID3716566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2017476 
End bp2019566 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content65% 
IMG OID 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_347537 
Protein GI77458032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGGTTCTTGC ACGTAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC 
CAGACCCATG TGCTCAAGGC TCTGATCAAT GCCTTGGACA GCCAGCGCCT GCACCACGCC
TACCTCTTCA CGGGTACGCG GGGCGTCGGC AAGACCACGA TTGCGCGGAT CATCGCCAAA
TGCCTGAACT GTGAAACAGG TATCACTTCA AGCCCGTGCG GCGAGTGTTC GGTGTGCCGC
GAGATCGATG AAGGCCGTTT CGTCGACCTG ATCGAGATCG ACGCCGCGAG CCGGACCAAG
GTCGAGGACA CCCGCGAGCT GCTCGACAAC GTGCAGTACG CCCCGAGCCG TGGGCGCTTC
AAGGTCTACC TGATCGACGA AGTGCACATG CTCTCCAGCC ATTCCTTCAA TGCGCTGCTC
AAAACCCTCG AAGAGCCGCC GCCCTACGTC AAGTTCATCC TGGCGACCAC CGACCCGCAG
AAACTTCCGG CAACGATTTT GTCGCGTTGC CTGCAGTTCT CCCTGAAGAA CATGACGCCT
GAGCGGGTCG TCGAGCATCT GACCCACGTT CTGGGCGCCG AAAATGTCCC GTTCGAAGAC
GACGCCCTGT GGCTGCTCGG CCGCGCGGCC GACGGTTCGA TGCGTGACGC CATGAGCCTG
ACCGACCAGG CCATCGCCTT CGGTGAAGGC AAGGTGTTGG CCGCCGACGT GCGGGCGATG
CTCGGTACGC TGGATCACGG CCAGGTCTAC GACGTGCTGC ACGCGCTGAT CGAAGGCGAC
GCCAAGGCGT TGCTCGAAGC GGTGCGTCAT CTCGCTGAAC AGGGGCCGGA CTGGAACGGC
GTGCTCTCGG AAATTCTCAA CGTGCTGCAC CGCGTCGCCA TCGCCCAGGC CTTGCCGGAA
GGTGTCGACA ACGGCCACGG CGACCGTGAC CGGGTGCTGG CACTGGCCCA GGCCTTGCCG
GCCGAAGACG TGCAGTTCTA TTACCAGATG GGCCTGATCG GTCGCCGCGA CTTGCCGCTG
GCGCCGGACC CGCGAGGCGG TTTCGAGATG GTGCTGCTGC GGATGCTGGC CTTCCGGCCA
GCAGACACGG CGGACGCCCC GAGGCAACCG CTAAAGCCAG TGGGGATCAG CCAGGCCACA
GTTGATTCCG CAAACTCAGT GGCTGCCGCG CCGAAACCTG CGCCGGTAGT TGCTGTGGCT
GTTGCGCCGG CGCCAGCGCC GGTGGTTGCA CCTGCGCCGG CTCCCGAGCC TGCACCGGTT
GCCCCGGTGA TTGCGCCTGA ACCCGTTCCT GAGCCCGAGG CCGAGCCCGA GCCGGTCGCC
GTCGAAGAAG TCGTCGATCT GCCGTGGAAT GACCCGGTAG AGCCGGCGCC TGTGCAGCAG
CCAGCGGTAG AACCGGTGCT GGAAACCACC GCCGAACAGC CTGACCTGCC GCCCATGCCG
CTGCCGACTC CGGACAGCGT CGTACCGGAC GCGCCGGAGT GGGCCGCCGC GCCGATCCCC
GAGCCATCAG TGGCCGACGT CGATGCCGCC ACACCGGGCA TGGACATGGA CGACGAGCCG
CCGCTCGACG AGGATTACAT CGAGCCGGAC ATGGATTCGG CCTACAGTTA CCTCGACGAT
CTGGCCAGCG AACACGCCGC AGAACCGGCT CCCGAGCCCG AGCCGGAACC CGCCGCCGCG
CCGGCCACCG GTCTGGCCCT GCAATGGCTG GAGCTGTTCC CGCAACTGCC GATCTCCGGG
ATGACCGGCA GCATCGCCGC CAACTGCACG CTGATCGCAG TCGATGGCGA CAACTGGCTG
ATGCACCTGG ACCCGGCCCA CAGCGCCTTG TTCAACGCCA CCCAGCAGCG TCGTCTGAAC
GATGCGCTGA ACCAGTTCCA CGGGCGCACG CTGACCCTGA CCATCGAGCT GATCAAGCCC
GAGCAGGAAA CTCCTGCCCA GGCGGCGTCC CGGCGCCGTG CCAACCGTCA GCGCGAGGCG
GAGGAATCGA TCCACGGCGA TCCGTTCATC CAGCAGATGG TCCAACAGTT CGGTGCGGTC
GTGCGACACG ATACTATTGA ACCTGTCGAC GCCCTGGTCA GTCAGGGCTA A
 
Protein sequence
MSYQVLARKW RPRSFREMVG QTHVLKALIN ALDSQRLHHA YLFTGTRGVG KTTIARIIAK 
CLNCETGITS SPCGECSVCR EIDEGRFVDL IEIDAASRTK VEDTRELLDN VQYAPSRGRF
KVYLIDEVHM LSSHSFNALL KTLEEPPPYV KFILATTDPQ KLPATILSRC LQFSLKNMTP
ERVVEHLTHV LGAENVPFED DALWLLGRAA DGSMRDAMSL TDQAIAFGEG KVLAADVRAM
LGTLDHGQVY DVLHALIEGD AKALLEAVRH LAEQGPDWNG VLSEILNVLH RVAIAQALPE
GVDNGHGDRD RVLALAQALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP
ADTADAPRQP LKPVGISQAT VDSANSVAAA PKPAPVVAVA VAPAPAPVVA PAPAPEPAPV
APVIAPEPVP EPEAEPEPVA VEEVVDLPWN DPVEPAPVQQ PAVEPVLETT AEQPDLPPMP
LPTPDSVVPD APEWAAAPIP EPSVADVDAA TPGMDMDDEP PLDEDYIEPD MDSAYSYLDD
LASEHAAEPA PEPEPEPAAA PATGLALQWL ELFPQLPISG MTGSIAANCT LIAVDGDNWL
MHLDPAHSAL FNATQQRRLN DALNQFHGRT LTLTIELIKP EQETPAQAAS RRRANRQREA
EESIHGDPFI QQMVQQFGAV VRHDTIEPVD ALVSQG