Gene Pfl01_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1798 
Symbol 
ID3716558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2005219 
End bp2005878 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_347530 
Protein GI77458025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0578188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCA AGGCGCCGGA CAGCCTCGCC GAGCAAATCG CTCACCACCT CGCCGAACGG 
ATCATTCGCG GCGAAATGAA GCCGGGAGAG CGCATCCAGG AACAAAAGGT CACGCTGGCG
CTGAACGTCA GCCGCGGCTC TGTCCGCGAA GCCTTGCTGA TCCTCGAGCG CCGTCACCTG
ATCGCGATCC TGCCGCGCCG AGGCGCCCAC GTCACCGAAC TGACGGCGCA CAAGGTGCAG
AGCCTGTGCA CGTTGATGAG CGAGTTGTAC ATCCTGCTCG GCAACGCCGT GGCCAATGGC
TGGCAGACCC AGGCCGACAT GGCGCCGTTC GTGCAGATCC AGCAGCGCCT GACCGCCAGC
TACGAGCGTC AGGACATCCG CACCTTCGTC GACGACAGCT TCAACGTGAT GCGCGCCGCG
TATCCGTTCG CCAACAACCC GTACCTGCAG GAAACCGTCG AGAACCTGCA ACCGGCCATG
AGCCGTGCGT ACTTCCTCGC GCTGGAGCAG CGCAAGGCCG AGATGAGCGA GTTCCTCGAA
CTGTTCGAAC GCTTGCTCGC TGCCGTCCTT GCCCGTGACC TGCCGCAGAT CCGCATCGTG
CTGACGGCTT ACGCCCAGCG CAGCTGCGAT CTGGTGGTGT CCGCCCTGAC GGTTGCCTGA
 
Protein sequence
MTFKAPDSLA EQIAHHLAER IIRGEMKPGE RIQEQKVTLA LNVSRGSVRE ALLILERRHL 
IAILPRRGAH VTELTAHKVQ SLCTLMSELY ILLGNAVANG WQTQADMAPF VQIQQRLTAS
YERQDIRTFV DDSFNVMRAA YPFANNPYLQ ETVENLQPAM SRAYFLALEQ RKAEMSEFLE
LFERLLAAVL ARDLPQIRIV LTAYAQRSCD LVVSALTVA