Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1798 |
Symbol | |
ID | 3716558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2005219 |
End bp | 2005878 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_347530 |
Protein GI | 77458025 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0578188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCA AGGCGCCGGA CAGCCTCGCC GAGCAAATCG CTCACCACCT CGCCGAACGG ATCATTCGCG GCGAAATGAA GCCGGGAGAG CGCATCCAGG AACAAAAGGT CACGCTGGCG CTGAACGTCA GCCGCGGCTC TGTCCGCGAA GCCTTGCTGA TCCTCGAGCG CCGTCACCTG ATCGCGATCC TGCCGCGCCG AGGCGCCCAC GTCACCGAAC TGACGGCGCA CAAGGTGCAG AGCCTGTGCA CGTTGATGAG CGAGTTGTAC ATCCTGCTCG GCAACGCCGT GGCCAATGGC TGGCAGACCC AGGCCGACAT GGCGCCGTTC GTGCAGATCC AGCAGCGCCT GACCGCCAGC TACGAGCGTC AGGACATCCG CACCTTCGTC GACGACAGCT TCAACGTGAT GCGCGCCGCG TATCCGTTCG CCAACAACCC GTACCTGCAG GAAACCGTCG AGAACCTGCA ACCGGCCATG AGCCGTGCGT ACTTCCTCGC GCTGGAGCAG CGCAAGGCCG AGATGAGCGA GTTCCTCGAA CTGTTCGAAC GCTTGCTCGC TGCCGTCCTT GCCCGTGACC TGCCGCAGAT CCGCATCGTG CTGACGGCTT ACGCCCAGCG CAGCTGCGAT CTGGTGGTGT CCGCCCTGAC GGTTGCCTGA
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Protein sequence | MTFKAPDSLA EQIAHHLAER IIRGEMKPGE RIQEQKVTLA LNVSRGSVRE ALLILERRHL IAILPRRGAH VTELTAHKVQ SLCTLMSELY ILLGNAVANG WQTQADMAPF VQIQQRLTAS YERQDIRTFV DDSFNVMRAA YPFANNPYLQ ETVENLQPAM SRAYFLALEQ RKAEMSEFLE LFERLLAAVL ARDLPQIRIV LTAYAQRSCD LVVSALTVA
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