Gene Pfl01_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1793 
Symbol 
ID3716553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1997974 
End bp1998738 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_347525 
Protein GI77458020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC AGTTGCAACC CCTCAAGAAA CAACCGCGAG CAGGCAAAGC CGGCCGCAGC 
GGAACCCAGG ACGATATTGT CTATGCGCAT ATCTTCGAGG CCATCCTCGA ACAACGCCTG
GCGCCCGGCA CCAAGTTGAG CGAAGAAGCG CTGGGGGAAA TTTTCGGGGT CAGCCGCACC
ATCATTCGCC GCGCGCTCTC GCGTCTGGCC CATGAAGGCG TGGTGCTGTT GCGGCCGAAC
CGTGGCGCGG TCGTCGCCAG CCCGAGCGTT GAAGAGGCGC GTCAGGTGTT CCTCGCCCGA
CGTCTGGTGG AACGCGCGAT CACCGAGCTG GCGGTGCAAC ACGCCACCGC CGAGCAGATC
GCCGAACTGC GCCAGATGGT CAACGACGAG CGCGACAGCT TCTCCCGTGG CGATCGCGGT
GCCGGCATCC GTCTCTCGGG TGAATTCCAC CTGAAACTGG CCGAAGCGGC GAAGAACGCG
CCGTTGATCA GCTTCCAGCG CAGCCTGGTT TCGCAGACGT CGCTGATCAT CGCCCAATAT
GAAAGCGGCA ACCGCTCGCA CTGTTCCTAC GATGAGCACA CCCAGTTGAT CGACGCCATC
GAAGCGCGCA ACGGTGAGCT GGCGGTGGAC CTGATGATGC ATCACATGGA TCACATCGAC
AGCAAGCTCA ACCTCGACGA GGAAAGTGCT TCGGACGATC TGCATGCAGT GTTCTCGCAC
CTGTTGCAGA CCAAGAAACC GGGGCGGCCG GCGGTCAAGC TCTGA
 
Protein sequence
MNEQLQPLKK QPRAGKAGRS GTQDDIVYAH IFEAILEQRL APGTKLSEEA LGEIFGVSRT 
IIRRALSRLA HEGVVLLRPN RGAVVASPSV EEARQVFLAR RLVERAITEL AVQHATAEQI
AELRQMVNDE RDSFSRGDRG AGIRLSGEFH LKLAEAAKNA PLISFQRSLV SQTSLIIAQY
ESGNRSHCSY DEHTQLIDAI EARNGELAVD LMMHHMDHID SKLNLDEESA SDDLHAVFSH
LLQTKKPGRP AVKL