Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1793 |
Symbol | |
ID | 3716553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1997974 |
End bp | 1998738 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_347525 |
Protein GI | 77458020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC AGTTGCAACC CCTCAAGAAA CAACCGCGAG CAGGCAAAGC CGGCCGCAGC GGAACCCAGG ACGATATTGT CTATGCGCAT ATCTTCGAGG CCATCCTCGA ACAACGCCTG GCGCCCGGCA CCAAGTTGAG CGAAGAAGCG CTGGGGGAAA TTTTCGGGGT CAGCCGCACC ATCATTCGCC GCGCGCTCTC GCGTCTGGCC CATGAAGGCG TGGTGCTGTT GCGGCCGAAC CGTGGCGCGG TCGTCGCCAG CCCGAGCGTT GAAGAGGCGC GTCAGGTGTT CCTCGCCCGA CGTCTGGTGG AACGCGCGAT CACCGAGCTG GCGGTGCAAC ACGCCACCGC CGAGCAGATC GCCGAACTGC GCCAGATGGT CAACGACGAG CGCGACAGCT TCTCCCGTGG CGATCGCGGT GCCGGCATCC GTCTCTCGGG TGAATTCCAC CTGAAACTGG CCGAAGCGGC GAAGAACGCG CCGTTGATCA GCTTCCAGCG CAGCCTGGTT TCGCAGACGT CGCTGATCAT CGCCCAATAT GAAAGCGGCA ACCGCTCGCA CTGTTCCTAC GATGAGCACA CCCAGTTGAT CGACGCCATC GAAGCGCGCA ACGGTGAGCT GGCGGTGGAC CTGATGATGC ATCACATGGA TCACATCGAC AGCAAGCTCA ACCTCGACGA GGAAAGTGCT TCGGACGATC TGCATGCAGT GTTCTCGCAC CTGTTGCAGA CCAAGAAACC GGGGCGGCCG GCGGTCAAGC TCTGA
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Protein sequence | MNEQLQPLKK QPRAGKAGRS GTQDDIVYAH IFEAILEQRL APGTKLSEEA LGEIFGVSRT IIRRALSRLA HEGVVLLRPN RGAVVASPSV EEARQVFLAR RLVERAITEL AVQHATAEQI AELRQMVNDE RDSFSRGDRG AGIRLSGEFH LKLAEAAKNA PLISFQRSLV SQTSLIIAQY ESGNRSHCSY DEHTQLIDAI EARNGELAVD LMMHHMDHID SKLNLDEESA SDDLHAVFSH LLQTKKPGRP AVKL
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