Gene Pfl01_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1792 
Symbol 
ID3716590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1996559 
End bp1997749 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID 
Productbenzoate membrane transport protein 
Protein accessionYP_347524 
Protein GI77458019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TCACCCACAC CCGACTGCGC CCGCTGGCGG ACACATCGCC CTCCGCCATC 
GTCGCCGGGT TCATTGCGAT GATGACCGGC TACACCAGTT CGCTGGTGCT GATGTTCCAG
GCCGGACAGG CGGCGGGCCT GACCAGCGGG CAGATCTCGT CATGGATCTG GGCGATTTCC
ATCGGCATGG CGGTCTGTTC AATCGGCCTG TCGTTGCGTT ATCGCACGCC GATCACGATC
GCCTGGTCGA CACCCGGCGC GGCGCTGTTG ATCACCAGCC TCGGCGGCGT AACGTATGGC
GAAGCCATCG GCGCCTACAT CACCTGCGCG GTGCTGGTAA CCCTTTGTGG CCTGACCGGC
AGCTTCGAAC GGCTGGTGAA AAAGATCCCG GCCTCCCTCG CCGCCGCGCT GCTGGCGGGG
ATTCTGTTCA AGATCGGCAG CGAAATCTTC GTCGCCGCGC AACACCGCAC CGGCCTGGTG
CTGGGGATGT TCTTCACTTA TCTCATCGTC AAACGCCTGT CGCCGCGTTA TGCGGTGCTC
GCCGCGCTGC TGATCGGCAC CGCGCTGTCG GGTTTCATGG GGCTGCTGGA CTTCAGCGGT
TTTCATCTGG AAGTGGCGAC ACCGGTCTGG ACCACGCCGC ACTTTTCCCT GGCTGCGACC
ATCAGCATCG GCATCCCGCT GTTTGTCGTA GCGATGACCT CGCAAAACAT GCCCGGCATC
GCCGTGCTGC GGGCCGACGG CTACAACGTC CCGGCCTCGC CGCTGATCAC CGCCACCGGC
ATCGCGTCCC TGCTGCTGGC GCCGTTCGGT TCCCACGGCA TCAACCTCGC GGCCATCAGC
GCGGCGATCT GCACCGGGCC GCATGCCCAT GAGGATCGCA ACAAACGCTA CACCGCGGCG
GTGTGGTGCG GGATTTTCTA CGGGATTGCC GGGGTATTCG GCGCCACGCT GGCGGCGCTG
TTTGCCGCGC TGCCCAAGGA GCTGGTGCTT TCGATTGCCG CGCTGGCGCT GTTCGGCTCG
ATCATCAACG GTTTGAGCAT CGCCATGACC GAGGTGAAGG AACGGGAAGC GGCGCTGATC
ACCTTCATGG TCACGGCGTC GGGGCTGACG CTGTTTTCCA TCGGTTCGGC GTTCTGGGGG
ATTGTCGCGG GGGTGCTGAC CTTGCTGATC CTCAACTGGC GCAAGGCCTG A
 
Protein sequence
MNEITHTRLR PLADTSPSAI VAGFIAMMTG YTSSLVLMFQ AGQAAGLTSG QISSWIWAIS 
IGMAVCSIGL SLRYRTPITI AWSTPGAALL ITSLGGVTYG EAIGAYITCA VLVTLCGLTG
SFERLVKKIP ASLAAALLAG ILFKIGSEIF VAAQHRTGLV LGMFFTYLIV KRLSPRYAVL
AALLIGTALS GFMGLLDFSG FHLEVATPVW TTPHFSLAAT ISIGIPLFVV AMTSQNMPGI
AVLRADGYNV PASPLITATG IASLLLAPFG SHGINLAAIS AAICTGPHAH EDRNKRYTAA
VWCGIFYGIA GVFGATLAAL FAALPKELVL SIAALALFGS IINGLSIAMT EVKEREAALI
TFMVTASGLT LFSIGSAFWG IVAGVLTLLI LNWRKA