| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1768 |
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| Symbol | prpD |
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| ID | 3716605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1965217 |
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| End bp | 1966701 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_347500 |
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| Protein GI | 77457995 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0512259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCA ACGTCGACCT GAACAACCGC CCCGACTACG ACCATGTCCT GCAGGATATC
GCCGATTACG TCCTCAGCTA CAAAATCACA TCCGCCGAAG CCCTCGACAC CGCCCGCAAC
TGCCTGATGG ACACCCTGGG CTGCGGCCTG CTGGCCCTGC GTTTCCCCGA ATGCACCAAA
CACCTTGGCC CAATCGTCGA AGGCACCGTC GTCCCATTCG GCGCCCGAGT CCCTGGCACC
TCCTATCGCC TCGACCCGGT GAAAGCGGCG TGGGACATCG GCTGCATCGT GCGCTGGCTC
GATTACAACG ACACCTGGCT CGCCGCTGAA TGGGGTCATC CGTCGGACAA CCTCGGCGGT
ATTCTCGCGG TGGCCGATCA CCTGTCGCAA AAGCGTCTGG CCAACGGCGA AGCGCCGCTG
ACCGTGCGCG ATGTACTTGA AGCCATGATC ATGGCCCACG AAATCCAGGG CGTGATCGCG
CTGGAGAACT CCTTCAATCG CGTAGGCCTC GACCATGTCA TTCTGGTGAA AGTCGCCTCG
ACCGCCGTGA CCGCCAAGCT GATGGGCGCC AACCGTGAGC AGTTGTTATC GGCGTTGTCT
CACGCGTTCG CCGACGGCCA GGCATTGCGC ACTTACCGCC ATGCACCAAA CGCCGGCTCG
CGTAAATCCT GGGCGGCAGG GGATGCATCG AGCCGGGGCG TGCGGCTGGC GGATATCGCG
ATGCGCGGCG AAATGGGCAT TCCCGGCGTC TTGAGTGCCA GACAGTGGGG CTTTTACGAC
GTTCTGTTCA GCCACACCAA CAACGATCTG GCGCTCAAAC CCGAAGACAA ACGCACCTTC
AGCTTCTCGC GACCGTTCGG CAGTTACGTG ATGGAAAACG TGCTGTTCAA GATCAGCTTC
CCCGCCGAGT TTCACGCGCA AACCGCCTGC GAGGCCGCCG TGACCCTGCA TCCGCAGGTA
CGCAATCGTC TGCATGAAAT TGATCGGATC GTCATCACTA CCCACGAGTC GGCGATCCGC
ATCATTTCCA AGGTCGGGCC GTTGGCCAAT GCCGCCGACC GCGATCACTG CCTCCAGTAC
ATGACCGCCG TGCCGCTGGC GTTCGGCAAT CTGGTAGCGG AGCAGTACGA GGATGATTTC
CACAAGGCCC ATCCGATCAT CGATGTGCTG CGCGAGAAAA TGGTCATCGT CGAAGATCCG
CGCTTCACCC GTGAATATCT GGAGGCCGAC AAACGCTCGA TTGCCAACGC GGTGCAGGTG
TTTTTCAAGG ACGGTTCGAG CACGGAAAAC GTGGTGGTGG AATACCCGAT CGGCCATCGC
CGGCGTCGCG CCGAGGGCAT TCCATTGCTG GAGGACAAGT TCAGGGCAAA TCTGGCCACC
CGTTTCACCG GGCAGCGCAG CGGGGAGATT CTTGCGCTGT GCAAGGATTC GGCGCGGCTT
GAAGCCACGC CGGTGAATCG GTTTATGGAT TTATTGGTTA TTTGA
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| Protein sequence | MSANVDLNNR PDYDHVLQDI ADYVLSYKIT SAEALDTARN CLMDTLGCGL LALRFPECTK
HLGPIVEGTV VPFGARVPGT SYRLDPVKAA WDIGCIVRWL DYNDTWLAAE WGHPSDNLGG
ILAVADHLSQ KRLANGEAPL TVRDVLEAMI MAHEIQGVIA LENSFNRVGL DHVILVKVAS
TAVTAKLMGA NREQLLSALS HAFADGQALR TYRHAPNAGS RKSWAAGDAS SRGVRLADIA
MRGEMGIPGV LSARQWGFYD VLFSHTNNDL ALKPEDKRTF SFSRPFGSYV MENVLFKISF
PAEFHAQTAC EAAVTLHPQV RNRLHEIDRI VITTHESAIR IISKVGPLAN AADRDHCLQY
MTAVPLAFGN LVAEQYEDDF HKAHPIIDVL REKMVIVEDP RFTREYLEAD KRSIANAVQV
FFKDGSSTEN VVVEYPIGHR RRRAEGIPLL EDKFRANLAT RFTGQRSGEI LALCKDSARL
EATPVNRFMD LLVI
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