Gene Pfl01_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1756 
Symbol 
ID3716593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1949913 
End bp1951457 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content61% 
IMG OID 
Productpermease for cytosine/purines, uracil, thiamine, allantoin 
Protein accessionYP_347488 
Protein GI77457983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGA GTCTCTCCAA TAACAACATC GCGCTGAATC TGCCCGCCTC TTCACCCCTC 
GACCACAGCG TGCCCGGTGA TGGCATCGCC GAACCACTGC AACTGAGCCC GCGTCTGCAC
AACAGCGACC TCGCGCCGAC CAAGGTCGAA GGACGGCGCT GGGGCAAATA CAGCATCTTT
GCCCTGTGGA CCAACGATGT GCACAACATC GCCAACTACT CGTTTGCCAT CGGTCTGTAC
GCCTTGGGCC TGGGCGGCTG GCAGATTCTG CTGTCGCTGG GGATCGGCGC GGCGCTGGTG
TACTTCTTCA TGAACCTGTC CGGCTACATG GGGCAGAAAA CCGGGGTGCC GTTTCCGGTG
ATCAGCCGGA TCAGTTTCGG CATTCACGGG GCACAGATTC CTGCATTGAT CCGGGCGGTG
ATCGCCATCG CCTGGTTCGG GATTCAGACG TACCTGGCGT CGGTGGTGTT TCGCGTGTTG
CTCACGGCAA TCCATCCCGG TTTCGCCGAC TACGACCACA ACTCGATCCT CGGCCTGTCG
AGCCTGGGCT GGGTGTGTTT CGTGGCGATC TGGTTTGTGC AGTTGGGGAT TCTGGCGTAT
GGCATGGAAA TGGTCCGCCG CTACGAAGCC TTCGCCGGGC CGGTGATTCT GCTGACCGTC
GCCTGCCTCG CCGCGTGGAT GTACACCCAG GCCAACGCTA CCATTGCCTG GTCGATTCGC
GAGCCGCTGA CCGGCGCCGA GATGTGGCGC AACATCTTTG CCGGCGGCGC CTTGTGGCTG
GCGATCTACG GCACGCTGAT CCTCAACTTT TGCGATTTCG CTCGCTCTTC ACCGTGCCGC
AAAACCATCA AGGTCGGAAA TTTCTGGGGC CTGCCGGTCA ATATTCTGGT GTTCGCCGGG
ATCACCGTCC TGCTGTGCGG TGCGCAATTT CACATCAACG GGCGGATCAT CGAAAGCCCG
ACCGAAATCA TTGCGTCGAT CCCCAACACG TTCTTTCTGG TACTCGGATG CCTGGCGTTC
CTGATCGTCA CCGTGGCGGT GAACATTATG GCCAACTTCG TCGCCCCGGC CTTCGTGCTG
AGCAACCTGG CGCCTAAATA CCTGACCTTC CGCCGCGCCG GGCTGATCAG CGCAACGATT
GCCGTACTGA TCCTGCCGTG GAACCTCTAC AACAGCCCGC TGGTGATCGT GTACTTCCTG
TCCGGCCTCG GCGCCCTGCT CGGCCCGTTG TACGGCGTGA TCATGGTCGA CTACTGGCTG
ATCCGCAAAG GCCGGATCCA CGTGCCGCAG CTGTACAGCG AACACCCGAA CGGTGCGTAT
TACTACAGTC GCGGGGTCAA TCTGCGGGCG GTCGCAGCGT TTATTCCGGC CGCCTTGATC
GCGATCGTCC TGGCGCTGGT GCCGGGCTTC CACAGCGTTT CGCCCTTCTC CTGGCTGATC
GGCGCCGGCA TTGCCGGGAT GCTCTACCTG ATCATCGCCA AACGCCAGCC GCACTACGCC
GACGTCGACG GTGAAGCCAT CGCCGTCGAC AACGTCAGCC ACTGA
 
Protein sequence
MRTSLSNNNI ALNLPASSPL DHSVPGDGIA EPLQLSPRLH NSDLAPTKVE GRRWGKYSIF 
ALWTNDVHNI ANYSFAIGLY ALGLGGWQIL LSLGIGAALV YFFMNLSGYM GQKTGVPFPV
ISRISFGIHG AQIPALIRAV IAIAWFGIQT YLASVVFRVL LTAIHPGFAD YDHNSILGLS
SLGWVCFVAI WFVQLGILAY GMEMVRRYEA FAGPVILLTV ACLAAWMYTQ ANATIAWSIR
EPLTGAEMWR NIFAGGALWL AIYGTLILNF CDFARSSPCR KTIKVGNFWG LPVNILVFAG
ITVLLCGAQF HINGRIIESP TEIIASIPNT FFLVLGCLAF LIVTVAVNIM ANFVAPAFVL
SNLAPKYLTF RRAGLISATI AVLILPWNLY NSPLVIVYFL SGLGALLGPL YGVIMVDYWL
IRKGRIHVPQ LYSEHPNGAY YYSRGVNLRA VAAFIPAALI AIVLALVPGF HSVSPFSWLI
GAGIAGMLYL IIAKRQPHYA DVDGEAIAVD NVSH