Gene Pfl01_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1738 
Symbol 
ID3716632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1929497 
End bp1930324 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content63% 
IMG OID 
Productcytochrome c, class I 
Protein accessionYP_347470 
Protein GI77457965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCG ATCACTTGAA AACGCTCATT CTATTTGGGG CCGCGCTGCT GAGCATGCCC 
CTGTCTGCCG CGCAGCTGAA CCTGGAGCTG GGCGCGAACA CCCGCACCTG GCAGACCGAG
GAGTTGCTCA AGCATCCTCA GGTACAAACC CTCACGGTCA AGAATGATGT GTCCTACAAG
AAGGACATGA CCTATCGCGC CGTGCCGATG GCCGCGCTGC TGACCGGCAT CAAACCGGAG
GATCACCTGC AAGCCGTAGC GCTGGACGGT TTCGCCGCCG AACTGTCCGC CGCGCCGCTA
CTGAACAACA AAGGCTCTCG CGCCTGGCTG GCCATCGAGG ATCCGGCGCA GCCCTGGCCG
CCGCTGTCGG AAGGCAAGCA CAGCGCCGGA CCGTTCTATC TGGTGTGGAC CGATCCGCAG
GCCGGCAATA TCAGCCCGGA ACAATGGCCG TTCGAAGTCG CCAGCATCAA GCGCATGGCA
CCGGTGGCCG AGCGCTTCCC TGCCCTGTTG CCGGATCCTG CGTTGAAGGC CGATGACCCG
GTGAATCAGG GCTTTGCCCT GTTCCAGAAG AACTGTCTGG CGTGCCATCG CCTGAATGGC
GCAGGCGATG CGCAGTTCGG GCCGGACCTG AATATTCCGT ACAACCCGAC CGAGTACTTC
GGCGCGGACT TCCTCAAGCG CTACATCCGC GATCCGCAGA GTCTGCGTCA GTGGCCGCAG
GCGAAGATGC CGGGGTTTAC CGCCGAGGTG TTGCCGGATG CGGATCTGCA GAAACTGATC
GGGTATTTGC AGCACATGGC CGGGCGCAAG GTTGCGCCCG CCAAGTAA
 
Protein sequence
MDGDHLKTLI LFGAALLSMP LSAAQLNLEL GANTRTWQTE ELLKHPQVQT LTVKNDVSYK 
KDMTYRAVPM AALLTGIKPE DHLQAVALDG FAAELSAAPL LNNKGSRAWL AIEDPAQPWP
PLSEGKHSAG PFYLVWTDPQ AGNISPEQWP FEVASIKRMA PVAERFPALL PDPALKADDP
VNQGFALFQK NCLACHRLNG AGDAQFGPDL NIPYNPTEYF GADFLKRYIR DPQSLRQWPQ
AKMPGFTAEV LPDADLQKLI GYLQHMAGRK VAPAK