Gene Pfl01_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1729 
Symbol 
ID3716680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1922467 
End bp1922985 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID 
Productankyrin 
Protein accessionYP_347461 
Protein GI77457956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC AAAGCCGCCA GATGACCCCA GAAGAAGCCG CCGAATTCAC CGAGCAGGTA 
TTCAACAAGG CGCGTGAGGG CGATGCGGTA ATGCTGGATC GCCTGATCAC TGCCGGTCTG
CCGGTGAACC TGACCAACAG CAAGGGCGAC ACCCTGCTGA TGCTCGCCAG TTACTACGGG
CATGTGGACG CGGTGCAAGT GTTGCTCAAG CACAAGGCCG ACCCGGAACA ACGTAACGGC
AACGGCCAAA GCCCGATTGC CGGCGCGGCG TTCAAGGGTG ACCTGGCCGT GGTCAAGGCG
TTGGTCGAAG GTGGGGCGCA GATTGAAGGT GCCTCTTTCG ACGGACGCAC GGCGTTGATG
ATGGCGGCGA TGTTCAACCG GGTTGAAATC GTCGACTACC TGATCGACCA GGGCGCCGAT
CCGAAAGCCA AGGATGCCAA CGGCATCACC GCGCTGGACG CGGCCCGCAC CATGGGCGCT
GTGGACACCA CCGCGCAGCT GGAAAAACTG CTGGGCTGA
 
Protein sequence
MSDQSRQMTP EEAAEFTEQV FNKAREGDAV MLDRLITAGL PVNLTNSKGD TLLMLASYYG 
HVDAVQVLLK HKADPEQRNG NGQSPIAGAA FKGDLAVVKA LVEGGAQIEG ASFDGRTALM
MAAMFNRVEI VDYLIDQGAD PKAKDANGIT ALDAARTMGA VDTTAQLEKL LG