Gene Pfl01_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1723 
Symbol 
ID3716674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1916694 
End bp1917839 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_347455 
Protein GI77457950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCGC TCCCGTACTG GCGGCTGTCC AGTTTCTATC TGTTCTATTT CGCCTTGCTC 
GGTTCGACGG CGCCGTTTCT GGCGCTGTAC TTCGATCACC TCGGTTTCAG TGCCGCGCGG
ATCGGCGAAC TGGTGGCGAT CCCGATGCTG ATGCGCTGCG TAGCACCGAA CATCTGGGGT
TGGCTTGGCG ATTACACCGG CAGGCGCCTG GCCATCGTGC GCTTCGGCGC GGTGTGCACG
CTGCTGACGT TCTCATTGAT TTTCGTCAGC AAGACCTACG CCTGGCTGGC GATGGTCATG
GCCTTGCACG CGTTTTTCTG GCACGCGGTG CTGCCGCAGT TCGAAGTCAT CACTCTGGCG
CATTTGCAGG GCCAGACCTC CCGCTACAGT CAGATTCGCC TGTGGGGCTC GATCGGTTTC
ATCATCACCG TGGTCGCCCT CGGTCGCCTG TTCGAATGGC TCAGCCTCGA CATCTACCCG
GCGGCGCTGG TGTTGATCAT GGCCGGCATC GTCCTCAGCA GTCTGTGGGT GCCGAATGCG
CAACCGCCTC AGGGCAACCG TCCGACGGGC GAGGGCTTTC TCAAACAGTT GCGCAATCCC
GGGGTGCTGG CGTTTTACGG TTGCGTGGCG CTGATGCAGA TGAGTCACGG GCCGTATTAC
ACGTTTTTGA CCCTGCACCT CGAACGACTG GGCTACAGCC GCGGCGTGAT CGGCATGCTC
TGGGCGGTCG GCGTGGTGGC GGAAGTGCTG ATGTTCATGG CCATGAGCCG GATCCTCGCG
CGTTTTTCCC TGCGGCGGGT GTTGATGGCG AGTTTTCTGC TGGCGGCGTT GCGCTGGTTG
CTGCTAGGTT CGTTCGCCGA GTTCCTGTGG GTCTTGCTGT TTGCCCAGGT GCTGCACGCG
GCGACGTTCG GCAGCTTTCA TGCGGCTGCC ATCGCGTTCG TGCAACGTAG CTTCGGCGCG
CGTCAGCAAG GGCAGGGTCA GGCGTTGTAT GCCGCGCTGG CTGGCACCGG TGGTGCGCTC
GGCGCGTTGT ATTCCGGCTA CAGCTGGAAT GCCCTCGGCG CGACATTGAC CTTTAGTATT
GCCAGTCTCG CAGCGCTCGC CGCTGCCGTT ATCATTGCCA TTCGAATGCA AGAGGACAGG
CCATGA
 
Protein sequence
MAALPYWRLS SFYLFYFALL GSTAPFLALY FDHLGFSAAR IGELVAIPML MRCVAPNIWG 
WLGDYTGRRL AIVRFGAVCT LLTFSLIFVS KTYAWLAMVM ALHAFFWHAV LPQFEVITLA
HLQGQTSRYS QIRLWGSIGF IITVVALGRL FEWLSLDIYP AALVLIMAGI VLSSLWVPNA
QPPQGNRPTG EGFLKQLRNP GVLAFYGCVA LMQMSHGPYY TFLTLHLERL GYSRGVIGML
WAVGVVAEVL MFMAMSRILA RFSLRRVLMA SFLLAALRWL LLGSFAEFLW VLLFAQVLHA
ATFGSFHAAA IAFVQRSFGA RQQGQGQALY AALAGTGGAL GALYSGYSWN ALGATLTFSI
ASLAALAAAV IIAIRMQEDR P