Gene Pfl01_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1722 
Symbol 
ID3716673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1915571 
End bp1916662 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content64% 
IMG OID 
Productchorismate synthase 
Protein accessionYP_347454 
Protein GI77457949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA ATACCTACGG CAAGCTGTTC ACTGTCACCA CCGCGGGCGA AAGCCATGGT 
CCGGCGTTGG TCGCCATTGT CGACGGCTGC CCGCCGGGCC TGGAGATTTC CCTTGAAGAT
CTGCAACGCG ACCTCGACCG TCGCAAGCCG GGCACCAGCC GCCACACCAC CCAGCGCCAG
GAAGCCGACG AAGTCGAAAT CCTTTCCGGC GTGTTCGAGG GCCGCACCAC CGGCTGCTCC
ATTGGCCTGC TGATTCGCAA CACCGACCAG AAGTCCAAGG ACTACTCGGC GATCAAGGAC
CTGTTCCGCC CGGCCCACGC CGACTACACC TACCACCACA AATACGGCGA GCGCGATTAT
CGCGGCGGCG GTCGCAGCTC CGCGCGGGAA ACCGCCATGC GCGTCGCGGC TGGCGCCATC
GCCAAGAAGT ACCTGGCCAG CCAAGGCATC GTCATTCGCG GCTACATGAG CCAGCTCGGC
CCGATCGAAA TCCCGTTCAA GACCTGGGAA TCGGTCGAGC AGAATGCCTT CTTCAGCCCG
GACCCGGACA AAGTGCCGGA GCTGGAAGCT TATATGGATC AGTTGCGCCG CGATCAGGAT
TCCGTCGGGG CGAAGATCAC CGTGGTTGCC GAAGGCGTGA TGCCGGGCCT GGGCGAGCCG
ATCTTCGACC GTCTCGATGC CGAACTGGCC CATGCGCTGA TGAGCATCAA CGCGGTCAAA
GGTGTGGAAA TCGGCGCCGG TTTCGCCTGC GTCGCCCAGC GCGGCACCGA ACACCGTGAC
GAGCTGACCC CGGAAGGTTT CCTCAGCAAC AACGCGGGCG GCATCCTTGG CGGGATCTCT
TCGGGGCAGC CGATCGTCGC GCACCTGGCC TTGAAGCCGA CCTCGAGCAT CACCACCCCG
GGCCGTTCGA TCGACATCGA TGGCAACCCG GTCGATGTCA TTACCAAGGG CCGTCACGAC
CCATGTGTCG GTATCCGCGC CACGCCGATT GCCGAGGCGA TGATGGCCAT CGTGTTGATG
GATCACCTGC TGCGCCACCG TGGCCAGAAC GCCGATGTGC GCGTGAGCAC CCCGGTGCTG
GGTCAGCTTT GA
 
Protein sequence
MSGNTYGKLF TVTTAGESHG PALVAIVDGC PPGLEISLED LQRDLDRRKP GTSRHTTQRQ 
EADEVEILSG VFEGRTTGCS IGLLIRNTDQ KSKDYSAIKD LFRPAHADYT YHHKYGERDY
RGGGRSSARE TAMRVAAGAI AKKYLASQGI VIRGYMSQLG PIEIPFKTWE SVEQNAFFSP
DPDKVPELEA YMDQLRRDQD SVGAKITVVA EGVMPGLGEP IFDRLDAELA HALMSINAVK
GVEIGAGFAC VAQRGTEHRD ELTPEGFLSN NAGGILGGIS SGQPIVAHLA LKPTSSITTP
GRSIDIDGNP VDVITKGRHD PCVGIRATPI AEAMMAIVLM DHLLRHRGQN ADVRVSTPVL
GQL