Gene Pfl01_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1720 
Symbol 
ID3716671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1913598 
End bp1914389 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347452 
Protein GI77457947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCCAGACTTC ACCCGACACC ACCGCTGAAA AAGACGCACC GCCAGCGGTC 
GAGCTGCCAT GGGCGGATGT CCACGTCGAG CACCACAAGA TGCTCCGCCT GGCGCCGTTG
CAGACCGACC GCAACACCGG CGGGCGGCCG CTGCGCTTCG TTGAATTCGG TTACGCCGAG
CGCAACGGCA AAGAACACAG CCTGATGCGC ATGGCGATCA AGTTGCCCGC TCAGCGAGTG
CGCAAAGAGC AGAATCACCT GGACGTGTGG GTCGACCACA CCACCAAGCG TGTGCATTTC
GGCCCGGACA GCGGTTTGCA GATCGAACCG CTGAACCGTG GCATCGGCCG TTTCATGGCT
GCCCAAGGCA TCAACTGGGC AAAAAAACGC TGGCCCACCT ACACCGTCGA CGGCATGGAC
TTGAACAACA AGGACGCGCT GAACGAAGAC ACTCGCTTGC GCCGCGATCA CTTTCTGCGG
GTGCATGGCT TTGATGTGGT TTACGCCGAC GCCCAGCATT TGAAGGGCAG CGTCAAAGAA
GTGAAGGTCG GCGACCTGCT GGGTGACTGG AACAGCGAAA AGCTGCAGAT TGTCGAAATT
CTCGAAGCTG CGCAGATGTT GCAGCAGGCC GAGCAGAATC TGGCCGAGCA GGAAGTGAAG
CTGAAGAAGC AGGAAGACAA GGTCAGCAAG TTCAAGCGCG AAGACGCCGG GCTGCGTTTC
ACTATTACCT GTCTGGTGGC GTTTGCGGTG TTTCAGGCCG GGTTGCTGAT CTGGATTGCT
ACGCACCGCT AA
 
Protein sequence
MTDTQTSPDT TAEKDAPPAV ELPWADVHVE HHKMLRLAPL QTDRNTGGRP LRFVEFGYAE 
RNGKEHSLMR MAIKLPAQRV RKEQNHLDVW VDHTTKRVHF GPDSGLQIEP LNRGIGRFMA
AQGINWAKKR WPTYTVDGMD LNNKDALNED TRLRRDHFLR VHGFDVVYAD AQHLKGSVKE
VKVGDLLGDW NSEKLQIVEI LEAAQMLQQA EQNLAEQEVK LKKQEDKVSK FKREDAGLRF
TITCLVAFAV FQAGLLIWIA THR