Gene Pfl01_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1718 
Symbol 
ID3716669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1911817 
End bp1912407 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_347450 
Protein GI77457945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.854731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTC CAAAAACGAT GTTTCAACTC AGCGGTCGCG GTTACGCAGC GGCCACGTTG 
AGCCATGCCA CCGTGGTCAT CATCGATGCC CAGAAAGAGT ACCTCAGCGG CCCGCTGGCC
CTGAGCGGCA TGGACGCGGC TGTCGCGAAC ATCAAACAAC TGGTTGCCGC CGCCCGCGCA
GCCGGTCGGC CGATCGTGCA CGTGCGTCAC CTCGGCACCG TCGGCGGTCT GTTCGACCCG
CAGGGCGAAC GCGGCGAGTT CATCCCCGGT CTGGAACCCC AGGGCGATGA AACCATCATC
GGCAAGTTGC TGCCGAGCGC CTTTCACGGC ACCGAACTCT ATGATCGTCT GCAAACCATC
GGCTCGCTGG ACCTGATCGT CTGCGGCTTC ATGAGTCACT CCAGCGTCAG CACGACTGTG
CGCGCGGCGA AAAACCTGGG CTTCCGCTGC ACCCTCGTCG AAGACGCCTG CGCCACCCGC
GATCTGCCGT TCAAGGGCCG CGTGCTCAGC GCCGAACAGG TGCAGGAAGC GGAAATGGCA
ATCATGGCCG ACAACTTCGC CACCCTCGCC CTGACCCAGG ATCTGATCTG A
 
Protein sequence
MSVPKTMFQL SGRGYAAATL SHATVVIIDA QKEYLSGPLA LSGMDAAVAN IKQLVAAARA 
AGRPIVHVRH LGTVGGLFDP QGERGEFIPG LEPQGDETII GKLLPSAFHG TELYDRLQTI
GSLDLIVCGF MSHSSVSTTV RAAKNLGFRC TLVEDACATR DLPFKGRVLS AEQVQEAEMA
IMADNFATLA LTQDLI