Gene Pfl01_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1711 
Symbol 
ID3716701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1906365 
End bp1907714 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content61% 
IMG OID 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_347443 
Protein GI77457938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0841088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAGCC GCAAATCCGA AGCATCGACG CTGGAACTCT CGCCGCCGTT ACGCACAGGC 
CTGCTGGAGC GCATCTTCAA ACTCAGCTTG CATGGCACCA CGGTGAAGAC CGAGCTGATT
GCCGGTCTGA CAACCTTCAT CACCATGGCC TACATCATTT TCGTCAACCC GAACATCATG
GCCGATGCCG GGATCGATCA CGGTGCAGCC TTCGTCGCCA CCTGTATCGC CGCCGCGCTG
GGCTGCCTGC TCATGGGCCT CTACGCCAAC TGGCCGGTGG GCCTGGCGCC GGGCATGGGC
CTCAACGCAT TCTTCACCTA CACCGTGGTC GGCACCATGG GCTACAACTG GGAAACGGCC
CTCGGTGCGG TGTTCGTCTC GGGCGTGCTG TTCATGATCC TGACCTTTTC GCGGATTCGC
GAATGGCTGC TCAACAGCAT TCCGGTCAGC CTGCGCTACG CGATGGGCGC CGGTGTGGGT
CTGTTCCTCG GGCTGATCGG CCTGAAAACC GCCGGTATCG TCGTCGATAG CCCGGCCACC
CTGATCAAGC TCGGCTCGCT GCGCGAACCC GGTCCGCTGC TTGCCGCCAT CTGCTTCCTG
ATGATCGCGA TCCTCAGTTA TCACAAAGTG TTCGGCGCAA TCCTCATCAG CATCATCACC
GTGACCCTGG CAGGCTGGGG CCTGGGCATC GTGCACTATG AAGGGATAAT GTCCACCCCG
CCGAGCCTGG CGCCGACCTT CATGGCCATG AATGTCGCCG GTGTATTCAA CGTCAGCATG
ATCAGCGTGG TACTGGCTTT CCTGTTCGTA CACATGTTCG ACACCGCCGG CACCTTGATG
GGCGTCGCCC AGCGCGCCAA TCTGGTGAAC CCTGACGGCC GTATCGAAAA CCTGTCCCGC
GCCATGAAAG CCGACAGCGC CTCCAGCGTA TTCGGCGCGG TCGTCGGCGT TCCGCCCGTC
ACCAGCTACG TGGAAAGTGC CGCCGGCGTA GCCGCTGGTG GTCGGACTGG TCTTACCGCA
GTCACCGTGG GTGTGCTATT TATAGCCGCG ATGTTCTTTG CACCGCTGGC CGGCATGATT
CCCGCCTATG CCACCGCTGG CGCGCTGATT TACGTAGCGA TGCTGATGAT GGGCGGCATG
GCACACATCG AATGGGACGA AGCGACCGAC AGCATTCCGG CGATCGTCAC CGCGATCATG
ATGCCGCTGA CCTTCTCGGT CGCCGACGGT ATCGCGCTGG GCTTCATTAC CTATGTCGCG
CTGAAGGCCG GCACCGGTAA ATACAAAGAG ATTTCCGTCA GCCTGTGGGT GCTCTGCGCG
ATCTTCATCG CCAAGTTCAT CTTCCTGTAA
 
Protein sequence
MESRKSEAST LELSPPLRTG LLERIFKLSL HGTTVKTELI AGLTTFITMA YIIFVNPNIM 
ADAGIDHGAA FVATCIAAAL GCLLMGLYAN WPVGLAPGMG LNAFFTYTVV GTMGYNWETA
LGAVFVSGVL FMILTFSRIR EWLLNSIPVS LRYAMGAGVG LFLGLIGLKT AGIVVDSPAT
LIKLGSLREP GPLLAAICFL MIAILSYHKV FGAILISIIT VTLAGWGLGI VHYEGIMSTP
PSLAPTFMAM NVAGVFNVSM ISVVLAFLFV HMFDTAGTLM GVAQRANLVN PDGRIENLSR
AMKADSASSV FGAVVGVPPV TSYVESAAGV AAGGRTGLTA VTVGVLFIAA MFFAPLAGMI
PAYATAGALI YVAMLMMGGM AHIEWDEATD SIPAIVTAIM MPLTFSVADG IALGFITYVA
LKAGTGKYKE ISVSLWVLCA IFIAKFIFL