Gene Pfl01_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1706 
Symbol 
ID3716696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1902038 
End bp1902964 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content61% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_347438 
Protein GI77457933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.332841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTG ACTACCCACG CGACCTGATC GGTTACGGCA GTAACCCTCC TCACCCACAC 
TGGCCGGGCA ATGCCCGGCT CGCCCTGTCG TTCGTACTCA ATTACGAAGA AGGCGGCGAG
CGCAACATCC TGCACGGCGA CAAAGAATCG GAAGCCTTCC TCTCGGAAAT GGTCGCGGCC
CAGCCTCTGC AAGGCGCGCG CAACATGAGC ATGGAATCGC TTTACGAGTA TGGCAGCCGT
GCCGGCGTCT GGCGGATCCT GAAACTGTTC AAGGAATTCG ACATTCCGCT GACCATCTTC
GCCGTGGCCA TGGCCGCCCA ACGTCACCCG GACGTGATCC GCGCGATGGT CGCGGCCGGT
CACGAGATCT GCAGCCACGG TTACCGCTGG ATCGACTACC AGTACATGGA CGAGGCGCAG
GAACGCGAGC ACATGCTCGA AGCGATCCGC ATCCTCACCG AACTCACCGG CGAACGCCCG
CTGGGCTGGT ACACCGGTCG CACCGGCCCG AACACCCGTC GCCTGGTGAT GGAAGAAGGC
GGTTTCCTCT ACGACTGCGA CACCTATGAC GACGACCTGC CCTACTGGGA ACCGAACAAC
CCGACCGGCA AGCCGCACCT GGTGATCCCG TACACCCTGG ACACCAACGA CATGCGCTTC
ACCCAGGTCC AGGGTTTCAA CAAGGGCGAC GATTTCTTCG AATACCTCAA GGATGCGTTC
GACGTGCTGT ATGCCGAAGG CGCCGAAGCA CCGAAGATGC TATCGATCGG CCTGCACTGC
CGTCTGATCG GCCGTCCGGC GCGTCTGGCT TCGCTTAAGC GCTTTATCGA ATACGCTAAA
AGTCATGAAC AGGTGTGGTT CAGCCGTCGC GTCGACATCG CACGTCACTG GCACGAAACC
CACCCGTACC AAGGGGCTGC CAAATGA
 
Protein sequence
MSADYPRDLI GYGSNPPHPH WPGNARLALS FVLNYEEGGE RNILHGDKES EAFLSEMVAA 
QPLQGARNMS MESLYEYGSR AGVWRILKLF KEFDIPLTIF AVAMAAQRHP DVIRAMVAAG
HEICSHGYRW IDYQYMDEAQ EREHMLEAIR ILTELTGERP LGWYTGRTGP NTRRLVMEEG
GFLYDCDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNKGD DFFEYLKDAF
DVLYAEGAEA PKMLSIGLHC RLIGRPARLA SLKRFIEYAK SHEQVWFSRR VDIARHWHET
HPYQGAAK