Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1706 |
Symbol | |
ID | 3716696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1902038 |
End bp | 1902964 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_347438 |
Protein GI | 77457933 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.332841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCTG ACTACCCACG CGACCTGATC GGTTACGGCA GTAACCCTCC TCACCCACAC TGGCCGGGCA ATGCCCGGCT CGCCCTGTCG TTCGTACTCA ATTACGAAGA AGGCGGCGAG CGCAACATCC TGCACGGCGA CAAAGAATCG GAAGCCTTCC TCTCGGAAAT GGTCGCGGCC CAGCCTCTGC AAGGCGCGCG CAACATGAGC ATGGAATCGC TTTACGAGTA TGGCAGCCGT GCCGGCGTCT GGCGGATCCT GAAACTGTTC AAGGAATTCG ACATTCCGCT GACCATCTTC GCCGTGGCCA TGGCCGCCCA ACGTCACCCG GACGTGATCC GCGCGATGGT CGCGGCCGGT CACGAGATCT GCAGCCACGG TTACCGCTGG ATCGACTACC AGTACATGGA CGAGGCGCAG GAACGCGAGC ACATGCTCGA AGCGATCCGC ATCCTCACCG AACTCACCGG CGAACGCCCG CTGGGCTGGT ACACCGGTCG CACCGGCCCG AACACCCGTC GCCTGGTGAT GGAAGAAGGC GGTTTCCTCT ACGACTGCGA CACCTATGAC GACGACCTGC CCTACTGGGA ACCGAACAAC CCGACCGGCA AGCCGCACCT GGTGATCCCG TACACCCTGG ACACCAACGA CATGCGCTTC ACCCAGGTCC AGGGTTTCAA CAAGGGCGAC GATTTCTTCG AATACCTCAA GGATGCGTTC GACGTGCTGT ATGCCGAAGG CGCCGAAGCA CCGAAGATGC TATCGATCGG CCTGCACTGC CGTCTGATCG GCCGTCCGGC GCGTCTGGCT TCGCTTAAGC GCTTTATCGA ATACGCTAAA AGTCATGAAC AGGTGTGGTT CAGCCGTCGC GTCGACATCG CACGTCACTG GCACGAAACC CACCCGTACC AAGGGGCTGC CAAATGA
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Protein sequence | MSADYPRDLI GYGSNPPHPH WPGNARLALS FVLNYEEGGE RNILHGDKES EAFLSEMVAA QPLQGARNMS MESLYEYGSR AGVWRILKLF KEFDIPLTIF AVAMAAQRHP DVIRAMVAAG HEICSHGYRW IDYQYMDEAQ EREHMLEAIR ILTELTGERP LGWYTGRTGP NTRRLVMEEG GFLYDCDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNKGD DFFEYLKDAF DVLYAEGAEA PKMLSIGLHC RLIGRPARLA SLKRFIEYAK SHEQVWFSRR VDIARHWHET HPYQGAAK
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