Gene Pfl01_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1696 
Symbol 
ID3716667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1892614 
End bp1893546 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_347428 
Protein GI77457923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.364618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCC CGCGTTTTCG AAAAGCATTT CTTGCCCCAC GCTTCTGGCC GCTCTGGTGC 
GGCCTCGGGC TGTTGTGGCT GATCGTGCAG TTGCCTTATC CGGCATTGCT CGCCATCGGC
CGTTTTCTCG GTGCCCTGAT GTATCGCTTC GCCGGCGACC GACGGCGCAT CGCCAAGCGC
AATCTGGAAC TGTGTTTCCC GGAAAAGTCC GCCGCCGAAC GCAAGCGCCT GCTCAAGGAA
AACTTTGCCT CCACCGGCAT CGCCTTCTTT GAAATGGCCA TGAGCTGGTG GTGGTCGCGT
CAGCGGCTGG CGAAACTGGC TCACGTCGAA GGCCTGGAGC ATCTGCAAAA GGCCCAGCGT
GAAGGCAAGG GCGTGATTCT GATGGCGGTG CATTTCACCA CCCTGGAAAT CGGCGCGGCG
CTGCTCGGCC AGCAGCACAC CATCGACGGC ATGTACCGCG AACACAAGAA CCCGCTGTTC
GACTTCGTCC AGCGTCAGGG CCGCGAGCGG CACAATCTCG ACTCGCTGGC GGTGGAACGT
GACGACGTGC GCGGCATGCT CAAGTTGCTG CGCGCAGGCC GGGCGATCTG GTATGCACCG
GATCAGGACT ACGGCGCCAA GCAAAGTATC TTTGTGCCGC TGTTCGGTAT TCAGGCCGCA
ACGGTCACTG CCACCAGCAA GTTCGCCCGG CTGGGCAAGG CGCTGGTGGT GCCGTTCACC
CAGGAACGTC TGGCTGACGG CAGCGGTTAT CGTCTGGTGA TTCATCCGCC GCTGGAAGGT
TTCCCGGGCG AGACCGAAGA AGAAGATTGC ATCCGCATCA ATCAGTGGGT CGAAGGCGTG
TTGCGTGAGT GTCCCGAGCA ATACTTGTGG GCACATCGGC GCTTCAAGAG TCGTCCGCCA
GGCGAGCCGA AGCTGTACGC CAAACGCGGT TGA
 
Protein sequence
MDRPRFRKAF LAPRFWPLWC GLGLLWLIVQ LPYPALLAIG RFLGALMYRF AGDRRRIAKR 
NLELCFPEKS AAERKRLLKE NFASTGIAFF EMAMSWWWSR QRLAKLAHVE GLEHLQKAQR
EGKGVILMAV HFTTLEIGAA LLGQQHTIDG MYREHKNPLF DFVQRQGRER HNLDSLAVER
DDVRGMLKLL RAGRAIWYAP DQDYGAKQSI FVPLFGIQAA TVTATSKFAR LGKALVVPFT
QERLADGSGY RLVIHPPLEG FPGETEEEDC IRINQWVEGV LRECPEQYLW AHRRFKSRPP
GEPKLYAKRG