Gene Pfl01_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1687 
Symbol 
ID3716658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1883599 
End bp1884312 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_347419 
Protein GI77457914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.282091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATG AGGCAACAAA AGCGGTGACA GCCATTGGCC AGATTCTTCA GGAACAACTC 
GACCATGGGT TGCTCGCAGC GGGGAGCAAA CTGCCAGCGG AGCGCAAGCT CAGCGAGTTG
TTCGGCACGA CCCGGATTAC GGTGCGTGAA GCCTTGTTGC AGCTGGAGGC GCAAGGGCAG
ATTTATCGCG AGGAGCGTCG GGGCTGGTTC GTGTCGCCGC CGCGTCTGGC CTACAACCTG
ATGCAGCGCA GTCACTTTCA CGCGATGGTC AGTGCGCAGG GGCGGGTGCC GTCGACCGAG
GTGATTTCGG CGCGGTTGCA GCCGGCTTCA GCGGCGGTCT GTGCGTGGTT GCAGTTGCCG
GCGTTGTCGA GCGTGATTCA GATTTGCCGG TCGCGGCGGA TCGATGGGCG GCTGGTGTTG
TATGTGGAGC ATTATCTGAA TCCGCAGTTT TTTCCGGGGA TTCTCGAGTT TGATCTGAAT
CAGTCGATTA CCGAGCTGTA TGCGCGGCAT TACGATTTGC ACTATGGGCG GGTGCGGTTC
GAGATTGTGC CTACGTCTTT ATCGGTCGAT GCGGCGGCGG CGTTGCGGGT GTCGGTGGGG
AGTCCGGGGT TGAGGATTGC TCGGGTTAAT TATGATCAGT TTGGGCGGTT GATTGATTGT
GATCTGGAGT TTTGGCGGCA TGATGCGATT CACGTGGGGG TTGATGTGGT TTGA
 
Protein sequence
MRDEATKAVT AIGQILQEQL DHGLLAAGSK LPAERKLSEL FGTTRITVRE ALLQLEAQGQ 
IYREERRGWF VSPPRLAYNL MQRSHFHAMV SAQGRVPSTE VISARLQPAS AAVCAWLQLP
ALSSVIQICR SRRIDGRLVL YVEHYLNPQF FPGILEFDLN QSITELYARH YDLHYGRVRF
EIVPTSLSVD AAAALRVSVG SPGLRIARVN YDQFGRLIDC DLEFWRHDAI HVGVDVV