Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1682 |
Symbol | |
ID | 3716653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1878580 |
End bp | 1879569 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_347414 |
Protein GI | 77457909 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.677404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATG TCAGCGTCCA ACACCTTCAG AAAAACTACG CCGGCACCAC CGTGTTCAGC GACATCAACT GCGAAATCCA GAAGGGCGAA TTCGTCACCC TGCTCGGCCC GTCCGGTTGC GGAAAATCCA CCCTGCTGCG CTGCATTGCC GGCCTGACGC CGGTGGATGG CGGCAAGATT CTGCTCGATG GTGTCGACAT CGTGCCGCTC ACCCCGCAGA AACGCGGGAT CGGCATGGTG TTCCAGAGCT ATGCGCTGTT CCCCAACATG ACCGTCGAAC AGAACGTCGC CTTCGGTTTG CGCATGCAAA AGGTCAATGC CGACGACAGC CACAAGCGGG TTGCCGAGGT GTTGAAATTG GTTGAACTCA ACGATTTCGC CAGCCGCTAT CCGCATCAGC TGTCCGGCGG TCAGTGCCAG CGTGTCGCCC TCGCCCGCTC GCTGGTGACC CGTCCGCGCC TGTTGCTGCT GGATGAACCG CTGTCGGCCC TCGATGCACG GATTCGCAAA CACTTGCGCG AACAGATCCG TCAGATCCAG CGCGAACTCG GCCTGACCAC GATTTTCGTC ACTCACGATC AGGAAGAAGC CCTGACCATG TCTGACCGGA TTTTCCTGAT GAATCAGGGA AAGATCGTAC AAAGCGGCGA CGCCGAAACC CTCTACACCG CCCCGGTCGA CGTATTCGCC GCCGGCTTCA TCGGCAACTA CAACCTGCTG GATGCGGAGA GTGCGTCGAA ACTGTTGCAG CGGCCGATCA ACCACCGCAT CGCGATCCGC CCGGAGGCCA TCGAATTGAG CCTCAGCGGC GAGCCCGATG CGCAGATTCG CAGCCACAGC CTGCTGGGCA ACGTGATTCG CTACCGCGTC GAAGCCCGGG GCGTGGAACT GGTGGTGGAT GTGCTCAACC GCTCGGCGGC GGATCTGCAT CCCGACGGTC AGCGCCTGTC ACTTTCCATC GATCCCACCG CCCTGTGTGA GGTAGCCTGA
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Protein sequence | MSYVSVQHLQ KNYAGTTVFS DINCEIQKGE FVTLLGPSGC GKSTLLRCIA GLTPVDGGKI LLDGVDIVPL TPQKRGIGMV FQSYALFPNM TVEQNVAFGL RMQKVNADDS HKRVAEVLKL VELNDFASRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK HLREQIRQIQ RELGLTTIFV THDQEEALTM SDRIFLMNQG KIVQSGDAET LYTAPVDVFA AGFIGNYNLL DAESASKLLQ RPINHRIAIR PEAIELSLSG EPDAQIRSHS LLGNVIRYRV EARGVELVVD VLNRSAADLH PDGQRLSLSI DPTALCEVA
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