| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1676 |
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| Symbol | |
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| ID | 3716739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1867470 |
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| End bp | 1872230 |
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| Gene Length | 4761 bp |
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| Protein Length | 1586 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Rhs family protein |
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| Protein accession | YP_347408 |
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| Protein GI | 77457903 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.143254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCCG TCACCCGCAT CGAGCAAGAA CTCGACAGCT TTCCCCGCAC CCTTGATCTC
TATCGCGAGC AGCTCAAGCA CTGGCTCAGT CGCTCGGCAG ACGGCGTCAG TCATGCGGCT
GATCTGCCTT CGCTGATGGG GATGGAGCGG ATCATCCGTT TCGGCGAGCA CAGCACGGCG
GTTGCGATTG ACGACAACCG CTTCTCCTCT GCGGTCGTGC AATGCCCGTA TTCCGGGCGA
ATGGAGATCG AGAGCAAGTT CGAGTCGGCG TACGACATTC CGTTGGGCGA CATCGTTGTC
GATGTGGTGG CGGTGGAAGG CGGTGCAGTC GAGTCCGTCA CCCTGGATGT TCAGGGCAAA
GGGGTGTTCA CCGGTGAAGC GGGCAAGTTT TATCGGGTCG TGGTGCACGG CGGCGCCAGC
GAGCAGCAGG TTGATGCGCT TTTCGAATCC TACGATGGCC TGACTCGGCA GCTGGATGGC
TGGCTGCGCA GCGAGTGGCA GGGTTTCAAG CCGCAGTGGT CGCAGTCGGT GGCCACGGCA
GCCGGGAACG GCATGCTGGC CGGGAGTTGG GCGGCGATCG AGGGGGTGTG GGACAGCATC
GGGTTGCTGT CGGAGATTCT CAAGGACCCC GGAAAGTTTG ACGAGCGTTT GGGCAGTGGC
GCCGCACAGA TGATCGCGTT GGCAGAAACA GCGCCGGAAA TGATGGAGAA GCTTCAGTTG
CTGGTCAGTG ACGAAGCAGC GCTGTGTTTG TTGCTGCGAA CTGCCAGCCT CTGGCTGGAG
ATGCTGCCAC CCAGTGAAAT TGCCGGGAAA ACCGCCGAGG CGGTATCGAT GGTAGTGGTG
CAACTGCTGA TCGATGTGTT GATCGGCGTT GTGTTGACCT TCGTTGGTGC CGGGGCGGGG
ATTGCGTATC TGACCTTGCG TCTGGCGGAG CGTGGCGCTC AGTTGCTGTC GGCGGTGACG
CGCCTGGTGA AGGCGATGTT CGGCATCGTC AGCACCTTCA TCGGCTACGT GAACCAGTAC
AAATCCGTCG CTGCACGGGG CATCGCCGCC GGGGTGAAAA AGGGCCGCAT GCAATTGCGC
TGGGATGCCC GGCGCAATGC CTCCCTGAAA AAAGACGAGC ACCACGACGA CACCCCGGAT
CAGGCGAAAA ATCCCAACGG TGACAGCGCC GATTGTGCAC CCCGAACCTG CACCAACGGG
TGTCCGGTGT CGATGGTCAC CGGCGAAGAG CTGCTGACGC TGACCGATGG CGTGCTCGAC
GGGCTGCTGC CGTTCGAGTT CAGCCGCTTG TATCGCAGCA GTGCGGTCGA GATCGATGTC
GGGCTGGGGT TTGGCTGGAG TCACTCGCTG GCGCATCGGC TGGAGGTCGA GGGCGCTGCG
GTGGTCTGGG TGGACCATGA GAACCGGCGG ACGCGGTTTC CGTTTCCGAG TGTCGAGCGG
CCGGAAATCC ACAACAGCTT GTCGCGGGCG GCGATCTTTC TCGGGGATGA GCCGGAGGAG
TTGATTGTTG CGCTGGCGGG GGACGCGGCG CGGTTTTATC ACTTTCGGGC TGGGCGTCTG
ACGGCGGTCA GCGATGCCTA TGGCAACCGG TTGCGTATTA CGCGGGATCG TCTGGATCGC
GTTGAGCGCC TCGACAACGG CGCTGGTCGC TCCTTGTTGC TGCGCTATGA GCGGGCGCAT
CTGGTCGCGG TCGACTATCA GGTTTTTCGG GAGTCTGCCT GGCGCACCGA GCAGACGCTG
GTCAGCTACC GCTTCGATGC CCGTCATCGA TTGATCGAGG CGACCAACGC CGTCGGCGAG
AGCGAGCGTT ACGACTACGA CGACCAGCAC GTCATCCTGC AACGGCAGTT AACGGGCGGC
GCGAGTTTCT TCTGGGCGTG GGAGCGTGGC GGCAAGGCGG CACGCTGCGT GCGGCACTGG
GCGTCGTTTT CGCAGATGGA CACGCGCTAC GTCTGGGATG ACGCCGGCCG TGTCACCGTG
CAGTACGTCG ACGGTCGCGA AGAGGTTTAT GTCCACGACG ACACGGCGCG GCTGGTGCGT
CAGGTGTCGG CGGACGGTGG CGAGCAGCTC AAGGCCTATG ACGCGCAAGG TCGGTTGGTC
GCCGAGCAGG ATGCGCTGGG GGCGGTCACC GAATACCGCT ACGACGATGC CGGACGGCTG
ATCGCGCTGA TTCCGCCGGA CGATGCGCCG ACGTCCTACG AGTACCGCAA CGGTTTCCTG
CACAGCCGCT CACGTGGCGA TGCCGTGTGG ACGTACCGGC GTAATGCCCA GGGTGACATC
ACCGAAGCGG TCGACCCGGA CGGCCATGTC ACCCATTACC ACCACGATGC ACAGGGCCGG
TTGCTGTCGA TCCGTTATCC GGATTCGGGT CGCCACGTGT TTGTGTGGAA CGACCTGGGT
CAGTTGGTCG AGGAAAGTTT GCCTGATGGC GGGGTTCGGA AGTTTTCCTA CGACCTGCAG
GGGCGACGGA TTACTGCGCA GGATGAACAC GGTGCCGTCA CCCGTCATGC GTGGGACGCC
GTTGGCCGGC TGATCCAGAC CACCTCGCCG AATGGCGCCA CCCGCGCCTG GTCCTACAGC
GCCTACGGCC AGATCACCGC CGAGCGCGAT GAACTGGGGC GTATCACCCG CTACGAATAT
GACGACGACC TGCACCTGGT CAGCCGGCGG ATCAACCCCG ACGGCACGCG CCTGCAATAC
CGCTACGACC ATGCGCAGCT GCTGCTCACG GAAATCGAGA ACGAGTCCGG CGAAAAGTAT
CGGCTGGACT ACACGCCCAC CGGACTGATC CGACAGGAAA CCGGCTTCGA TGGTCGGCGC
ACCGCCTACG TCTACGACCG CAACGGTCAT CTGCTGGAGA AGACCGAGTT CGGCGATGAC
GGCTCGACGC TGGTCACCGG CTACCAACGT GATGCTGCTG GGCGTCTGCT GCTCAAGACC
CTGCCGGACG GGGTCGAGGT CAGCTATCGC TATGACCGTT TAGGCCGTTT GGTCGGCGTG
GATGATGGCC AGGATCACCC GCTGGCTTTC GAATATGACC TGCAGGACCG GCTGGTGCGC
GAGCATCAGG GCTGGGGCAC CCTGCGTTAC ACCTACGACG CCTGCGGCCA GCTAAGCCGG
ATGCGCCTGC CGGACAACAG CAAGCTCGAT TATCACTACG CCAAGGGCGG CGCGCTGACC
GCGATCGACC TCAACGGCGC CTTGCTCACC CGTCACGTCT ACCAGAGCGG CCGCGAACAA
CAGCGCCAGC AAGGCCTGCT GCTCAGCGAA TATGCCTACG ATGAACAGGG CCGCTTACGC
GCCCACGCCG TAGGCCATCA ACGCAGCGCG CTGTACCGCC GCGACTTTGC CTACAGCGCC
AACGGCAACC TCGAACACAT CGCCGACACC CGCCACGGCC AGCGCAGCTA CACGTACGAC
GCCCTCGACC GGCTGATCCG CGTACGCCAC ACCCGTGACG ACCTGCCGGA AACCTTCGCC
CACGACCCGG CCGGCAACCT GCTGATGCAG GACCGCCCCG GCCCGACGCA GATCAAAGGC
AACCGCCTGC AAATGCAGGG CGACCGCCAC TACGACTACG ACGCCTTCGG CAACCTGATC
CGCGAACGCC GTGGCCGCGC GCAAACCCTC GTCACCGAAT ACCGCTACGA CAGCCAGCAC
CGCCTGATCG GCCTGACCCG TCCCGACGGC ACCAGCGCGA CCTACCAATA CGACGCCTTC
GGCCGGCGCA TCCGCAAAAC CGTCAACGGC CAGACCACCG AATTCTTCTG GCAAGGCGAC
CACCTGATCG CCGAAAGCAG CCAGGAACAG CACCGCAGCT TCATCTACGA ACCCGGCACC
TTTCGCCCCT TGGCGATGCT CGACGGCAGA GGCCCGAAAC GCGCCTGCCC GTTCTACTAC
CAACTCGACC ACCTCGGCAC CCCGCAGGAG TTGACCGACT ACAGCGGCGA CATCGTCTGG
TCAGCCAAAT ACAGCGCCTA CGGCAAGGTC ACCTCGCTGG AGCTCGCGAC CGAGGACTAC
CTGAACCAGC CGCTGCGCTT TCAGGGGCAA TATTTCGATG ACGAAAGCGG GCTGCATTAC
AACCGGCACC GGTATTACGA CCCGGACGTG GGCCGGTACC TGACGCCGGA TCCGGTGAAG
TTGGCGGGTG GGTTGAATCA GTACCGGTAC GTGCCGAATC CGACGGGGTG GGTGGATCCG
TTGGGGTTGA GCTCCAACTG TCCGCCGCCC AAAAACAATA AGATCCAGAA GTGCTCAGTA
CCAATTCAGG CTAACAAACC TAACGTAAAT CAAGGGTTGC CTATCGTTCC GGCGGTTGGT
AAAGATGGGC CAAAAAATGA AGCTGAAGCT AAACGTCAGG TATTAGCTTG GAACAGACAA
TACAGAATGC ACTCTGTAGA AAAACATGGG CCAGAAATTG ACGATGCAGC TTTAAAGCAG
AGGTCAATAG ACGGCTCACA TCCAACAAAA AAAGGCGTTA GAGGGATGGT GGGGCCGAGT
TCTCAATTCC GTAGTTGGAT GATGCAGTTT CGAGCGTTGC ATTTTGCTTT ATCCAGGATG
CATAAAAAAG TTCCTGAGCC TACAGGGTAT GATGCTGACC AAAATCCTAT TGTTAGGATG
AAACTGCCAG GAGCAGGTCG TGGCTATAAA CCTAATGAAA GAGATCTAAG CAATCCTCGT
TATATAGATA GCTTGGATGG GGCGGAAGTG AAATTTGATA AACGAGATAT TACACGGCCA
TTTACTGGCT TTCCAAGATA G
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| Protein sequence | MDAVTRIEQE LDSFPRTLDL YREQLKHWLS RSADGVSHAA DLPSLMGMER IIRFGEHSTA
VAIDDNRFSS AVVQCPYSGR MEIESKFESA YDIPLGDIVV DVVAVEGGAV ESVTLDVQGK
GVFTGEAGKF YRVVVHGGAS EQQVDALFES YDGLTRQLDG WLRSEWQGFK PQWSQSVATA
AGNGMLAGSW AAIEGVWDSI GLLSEILKDP GKFDERLGSG AAQMIALAET APEMMEKLQL
LVSDEAALCL LLRTASLWLE MLPPSEIAGK TAEAVSMVVV QLLIDVLIGV VLTFVGAGAG
IAYLTLRLAE RGAQLLSAVT RLVKAMFGIV STFIGYVNQY KSVAARGIAA GVKKGRMQLR
WDARRNASLK KDEHHDDTPD QAKNPNGDSA DCAPRTCTNG CPVSMVTGEE LLTLTDGVLD
GLLPFEFSRL YRSSAVEIDV GLGFGWSHSL AHRLEVEGAA VVWVDHENRR TRFPFPSVER
PEIHNSLSRA AIFLGDEPEE LIVALAGDAA RFYHFRAGRL TAVSDAYGNR LRITRDRLDR
VERLDNGAGR SLLLRYERAH LVAVDYQVFR ESAWRTEQTL VSYRFDARHR LIEATNAVGE
SERYDYDDQH VILQRQLTGG ASFFWAWERG GKAARCVRHW ASFSQMDTRY VWDDAGRVTV
QYVDGREEVY VHDDTARLVR QVSADGGEQL KAYDAQGRLV AEQDALGAVT EYRYDDAGRL
IALIPPDDAP TSYEYRNGFL HSRSRGDAVW TYRRNAQGDI TEAVDPDGHV THYHHDAQGR
LLSIRYPDSG RHVFVWNDLG QLVEESLPDG GVRKFSYDLQ GRRITAQDEH GAVTRHAWDA
VGRLIQTTSP NGATRAWSYS AYGQITAERD ELGRITRYEY DDDLHLVSRR INPDGTRLQY
RYDHAQLLLT EIENESGEKY RLDYTPTGLI RQETGFDGRR TAYVYDRNGH LLEKTEFGDD
GSTLVTGYQR DAAGRLLLKT LPDGVEVSYR YDRLGRLVGV DDGQDHPLAF EYDLQDRLVR
EHQGWGTLRY TYDACGQLSR MRLPDNSKLD YHYAKGGALT AIDLNGALLT RHVYQSGREQ
QRQQGLLLSE YAYDEQGRLR AHAVGHQRSA LYRRDFAYSA NGNLEHIADT RHGQRSYTYD
ALDRLIRVRH TRDDLPETFA HDPAGNLLMQ DRPGPTQIKG NRLQMQGDRH YDYDAFGNLI
RERRGRAQTL VTEYRYDSQH RLIGLTRPDG TSATYQYDAF GRRIRKTVNG QTTEFFWQGD
HLIAESSQEQ HRSFIYEPGT FRPLAMLDGR GPKRACPFYY QLDHLGTPQE LTDYSGDIVW
SAKYSAYGKV TSLELATEDY LNQPLRFQGQ YFDDESGLHY NRHRYYDPDV GRYLTPDPVK
LAGGLNQYRY VPNPTGWVDP LGLSSNCPPP KNNKIQKCSV PIQANKPNVN QGLPIVPAVG
KDGPKNEAEA KRQVLAWNRQ YRMHSVEKHG PEIDDAALKQ RSIDGSHPTK KGVRGMVGPS
SQFRSWMMQF RALHFALSRM HKKVPEPTGY DADQNPIVRM KLPGAGRGYK PNERDLSNPR
YIDSLDGAEV KFDKRDITRP FTGFPR
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