Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1667 |
Symbol | |
ID | 3716726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1858496 |
End bp | 1859461 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | bile acid:sodium symporter |
Protein accession | YP_347399 |
Protein GI | 77457894 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0104917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00786387 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGCAC TGGCTGCACT GAGTCGTTTT GTCGGCAATA CCTTCGCTTA CTGGGTTCTG ATTTTCGCGG TGATCGCGTT CCTGCAACCG GCCTGGTTCC TCGGTCTGAA AGGCGCGATC GTGCCACTGC TCGGGCTGGT GATGTTCGGC ATGGGCCTGA CCCTCAAGCT CGACGACTTC GCCGCCGTCG CCCGCCATCC GTGGCGTGTG GCGCTGGGGG TCGTCGCGCA TTTCGTGATC ATGCCGGGGA TGGCGTGGCT GCTGTGCCAG ATCTTTCATT TGCCGCCGGA AATCGCCGTC GGCGTGATTC TGGTCGGTTG CTGCCCGAGC GGCACCTCCT CGAACGTCAT GACCTGGCTG GCCCGTGGCG ACCTGGCGCT GTCGGTGGCG ATCGCCGCCG TCACCACCCT CCTCGCCCCG TTGCTGACGC CGGCGCTGAT CTGGCTGCTG GCCTCGGCCT GGTTGCCGGT TTCGTTCATG GAATTGTTCT GGTCGATCCT GCAAGTGGTG CTGCTGCCGA TCGTCCTCGG CGTGGTCGCG CAACGTGTGC TCGGTGACAA GGTGCGCCAC GCGGTGGAAG TGTTGCCGCT GGTGTCGGTG ATCAGCATCG TGATCATCGT CGCCGCCGTG GTTGCCGCCA GTCAGGCAAA AATCGCCGAA TCCGGCCTGC TGATCATGGC CGTGGTGATG CTGCACAACA GCTTCGGCTA TTTGCTGGGT TATTTCACCG GGCGCCTGTT CGGCCTGCCG CTGCCGCAGC GCAAGTCCCT GGCGCTGGAA GTCGGCATGC AGAACTCGGG GTTGGGGGCT GCGCTGGCCA GTGCGCACTT CTCGCCGCTG GCGGCGGTGC CGAGCGCGTT GTTCAGTGTG TGGCACAACA TTTCCGGGGC ACTGCTTTCG ACGTACTTCC GGCGGATGAG CGAAAAACAA GACAGTGAAA CGCTGGCGCA ACAGGCGGCC GACTGA
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Protein sequence | MRALAALSRF VGNTFAYWVL IFAVIAFLQP AWFLGLKGAI VPLLGLVMFG MGLTLKLDDF AAVARHPWRV ALGVVAHFVI MPGMAWLLCQ IFHLPPEIAV GVILVGCCPS GTSSNVMTWL ARGDLALSVA IAAVTTLLAP LLTPALIWLL ASAWLPVSFM ELFWSILQVV LLPIVLGVVA QRVLGDKVRH AVEVLPLVSV ISIVIIVAAV VAASQAKIAE SGLLIMAVVM LHNSFGYLLG YFTGRLFGLP LPQRKSLALE VGMQNSGLGA ALASAHFSPL AAVPSALFSV WHNISGALLS TYFRRMSEKQ DSETLAQQAA D
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