Gene Pfl01_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1645 
Symbol 
ID3716818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1835882 
End bp1836889 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content66% 
IMG OID 
Productthreonine-phosphate decarboxylase 
Protein accessionYP_347377 
Protein GI77457872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.26807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0171686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC ACGGTGGCCG GTTGCGCAGG GCGGCGCTCG AATACGGCAT CGCGGAAGAA 
GACTGGCTCG ACCTGTCTAC GGGCCTGGCG CCGTGGCCGT TTCCGGTCCC GGACATCCCG
CTGCGGGCCT GGGCGCGTTT GCCGGAAAAC GATGACGGCC TGGAGCAGGC CGCCTGCGAT
TACTACGGCG CCAGCCAGGT GTTGCCAGTG GCCGGTTCGC AGATGGCCAT TCAGTTGCTG
CCGCGTTTGC GTAGGGCCGG CAAGGTCGGC GTGCTGTCGC CGTGTTATGC CGAACATGCC
GAAGCCTGGC GGCGCAGCGG CTATATCGTC CGCGAAGTGC TGGAGCAGGA AGTCGACTTC
TTTCTCGACA GCCTCGACGT GCTGGTGGTG GTCAATCCGA ACAATCCAAC AGGCCTGAAC
CTGACCCCGG CGCGCCTGCT CGACTGGCAC GCACGGCTGG CCCAGCGCGG CGGCTGGCTG
GTGGTCGACG AAGCGTTCAT GGACAACACG CCGCAGTTGA GCCTTGCCCC GCATGCGCAT
CAAGTGGGGT TGATCGTGTT GCGCTCGTTC GGCAAGTTTT TCGGTCTGGC CGGTGTGCGG
CTGGGCTTCG TGCTGGCCGA GCGCAAGTTG CTCCGGTTGC TGGCCGAACA GGTCGGGCCC
TGGGCAGTCA GCGGACCGAC GCGGGTGCTG GGGCAGGCTT GTCTGCGCGA CACCGAAGGC
CATACCCGCC AGCGCATCCG CAGCGACGAG GCCAGCGAAC GATTGGCTGC GCTACTTGAG
CGGCACGGCT TCAAACCGCA GGGCGGCTGC GCACTGTTTC AGTGGCTGAT CACCGAACAG
GCCGCCGCGC TGCACGAATT CATGGCCCGC CGCGGCATTC TTCTGCGCCT GTTCGCGCAC
AACAGCAGCC TGCGTTTTGG GCTGCCCGCC GATGCCGCCG ACGAGGCGCG TCTTGAGCAA
GCCCTGCAAG CATTCGCCAA GCATTGCTCC ATGGAAAAAC CAGCATGA
 
Protein sequence
MLEHGGRLRR AALEYGIAEE DWLDLSTGLA PWPFPVPDIP LRAWARLPEN DDGLEQAACD 
YYGASQVLPV AGSQMAIQLL PRLRRAGKVG VLSPCYAEHA EAWRRSGYIV REVLEQEVDF
FLDSLDVLVV VNPNNPTGLN LTPARLLDWH ARLAQRGGWL VVDEAFMDNT PQLSLAPHAH
QVGLIVLRSF GKFFGLAGVR LGFVLAERKL LRLLAEQVGP WAVSGPTRVL GQACLRDTEG
HTRQRIRSDE ASERLAALLE RHGFKPQGGC ALFQWLITEQ AAALHEFMAR RGILLRLFAH
NSSLRFGLPA DAADEARLEQ ALQAFAKHCS MEKPA