Gene Pfl01_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1642 
Symbol 
ID3716815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1833042 
End bp1834337 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_347374 
Protein GI77457869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0192949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCAAC CACGTCACTG CCCGGCGGTT CTGATCGCCG CGCCGGCTTC CGGTCAGGGC 
AAGACCACCG TCACCGCCGC GCTGGCCCGT CTGCATCGCA ATCAGGGGCG CAAGGTCCGC
GTGTTCAAAT GCGGCCCGGA CTTTCTCGAC CCGATGATCC TCGAGCGCGC CAGCGGTGCG
CCGGTCTATC AACTGGACAT GTGGATGGTC GGCGAGCAGG AAAGTCGTCG CCTGTTGTGG
GAAGCCGCCG CCGAAGCCGA TCTGATCCTG ATCGAAGGCG TGATGGGTTT GTTTGACGGT
ACGCCGTCGA GCGCCGATCT GGCGCGGCAT TTCGGCGTGC CGGTGCTCGG CGTGATCGAC
GGCACGGCCA TGGCGCAGAC CTTCGGCGCT TTGGCTCTGG GTTTGGCGCG CTATCAGCCG
GACCTGCCGT TCGCCGGCGT GCTGGCCAAC CGTGTCGGCA CGGTGCGCCA TGCGCAATTG
CTCGAAGGCA GCCTCACCGA AGGTTTGCGC TGGTATGGCG CGTTGTCCCG GGAAACCGGG
ATCGAACTGC CGAGCCGCCA TCTCGGTCTG GTGCAGGCCA GCGAACTCAA TGACCTCGAT
GTGCGCCTCG ACGCCGCCGC CGAAGCGCTG GCCGGCACTT GCGAGGTAGC GCTGCCACCG
GCCGTGGAAT TCGCCGCCCC AGAAATCGTT GAGACCGAAA AGCTGCTCGA AGGCGTGCGA
ATTGCTGTCG CCCGCGACGA AGCCTTCGCT TTCACCTATG GCGCCAGTCT TGATCTGTTG
CGGGCGATGG GCGCCGAGTT GAGTTTCTTC TCGCCGATCC GCGATATGCA ATTGCCCGAC
GCCGACAGTT TGTACCTGCC CGGCGGCTAT CCGGAATTGC ACCACGTTGC CTTGTCGCAG
AACGCCTACA TGCTCAAAGC GATCCGCGCG CACCATGCGG CTGGCAAACC ATTGCTTGCC
GAATGCGGCG GCATGCTTTA TCTGCTCGAC TCGCTGACCG ATGTCGAAGG CACCCGCGCG
GAGCTGGTCG GCCTGTTGAG TGGCGACGCC GTGATGCAAA AGCGCCTCGC CGCGCTGGCG
CTGCAAGAGG TCGACCTGCC GGAAGGCCTG TTGCGCGGCC ACACCTATCA CCATTCCCTG
ACCACCACCG AACTGACGCC GATTGCCCGT GGCCACAGCC CCAATGGGGG GCGCGGCGCA
GAAGCGGTGT ACCGGCAAGG GCGGATGACC GCCTCGTACG TACATTTTTA CTTCCCGTCG
AATCCGTCGG CGATTGCCGC ACTGTTGGTG CCATGA
 
Protein sequence
MNQPRHCPAV LIAAPASGQG KTTVTAALAR LHRNQGRKVR VFKCGPDFLD PMILERASGA 
PVYQLDMWMV GEQESRRLLW EAAAEADLIL IEGVMGLFDG TPSSADLARH FGVPVLGVID
GTAMAQTFGA LALGLARYQP DLPFAGVLAN RVGTVRHAQL LEGSLTEGLR WYGALSRETG
IELPSRHLGL VQASELNDLD VRLDAAAEAL AGTCEVALPP AVEFAAPEIV ETEKLLEGVR
IAVARDEAFA FTYGASLDLL RAMGAELSFF SPIRDMQLPD ADSLYLPGGY PELHHVALSQ
NAYMLKAIRA HHAAGKPLLA ECGGMLYLLD SLTDVEGTRA ELVGLLSGDA VMQKRLAALA
LQEVDLPEGL LRGHTYHHSL TTTELTPIAR GHSPNGGRGA EAVYRQGRMT ASYVHFYFPS
NPSAIAALLV P