Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1637 |
Symbol | |
ID | 3716810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1828496 |
End bp | 1829176 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | NLP/P60 |
Protein accession | YP_347369 |
Protein GI | 77457864 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.58461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.048116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCTGA TAGCGGGCAT AGTCTCGGCT TCTTTACAAC TATCAGCCAC GGTCGTGCCC ATGCTAAAGC GCTTCGCACC CCTCGTGCCT CTCGCACTCG TCACCCTGTT GTTCGGTTGC GCTGCTCATT CACCTGTTAA TCAAGAGCAG CAACAACAGG TTAAAAATTC TGCCACCGCA CAGTCTTCCG TTATTTACCA GGAAGAGCTG GACACCGAAA AAGAACTCGC CGACTTCAAC GGCAAGAAGC CTTACCAGCT TCCGGTTCTG GCTGACAGCA TCCTCGAACG CGGCATGTCC CTGATCGGTA CCCGTTACCG TTTCGGCGGT ACCTCTGAAG CCGGTTTCGA TTGCAGCGGT TTCATCGGCT ACCTGTTCCG CGAAGAAGCG GGCATGAACC TGCCGCGCTC CACCCGCGAA ATGATCAACG TTGATGCGCC GCTGGTTTCG CGCAGCAACC TCGAGCCGGG CGACCTGCTG TTCTTCGCCA CCAATGGTCG TCGCGGTCGT GTCAGCCACG CCGGGATCTA CCTGGGCGAC AACCAGTTCA TCCATTCCAG CTCTCGTCGC AGCGGCGGTG TTCGCATCGA CAGCCTGGGC GACAGCTACT GGAGCAAGAC CTTCATCGAA GCCAAACGCG CTTTGGCGAA CGCTCCGACC GTGGTTACTG CTCGCAAGTA A
|
Protein sequence | MRLIAGIVSA SLQLSATVVP MLKRFAPLVP LALVTLLFGC AAHSPVNQEQ QQQVKNSATA QSSVIYQEEL DTEKELADFN GKKPYQLPVL ADSILERGMS LIGTRYRFGG TSEAGFDCSG FIGYLFREEA GMNLPRSTRE MINVDAPLVS RSNLEPGDLL FFATNGRRGR VSHAGIYLGD NQFIHSSSRR SGGVRIDSLG DSYWSKTFIE AKRALANAPT VVTARK
|
| |