Gene Pfl01_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1636 
Symbol 
ID3716809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1827637 
End bp1828341 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content59% 
IMG OID 
ProductDNA replication initiation factor 
Protein accessionYP_347368 
Protein GI77457863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.118213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0490355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA TTCAGCTGCC CCTAGGTGTG CGTCTGCGTG ACGACGCCAC CTTCATCAAC 
TACTACCCAG GCGCCAATGC CGCTGCACTC GGCTATGTCG AGCGTCTATG CGAAGCCGAC
GCCGGCTGGA CCGAAAGCCT GATCTATCTG TGGGGCAAGC ACGGAGTAGG GCGTACGCAT
CTGTTGCAGG CCGCGTGCCT GCGCTTCGAA CAGATGGGTG AACCGGCGGT GTACCTGCCG
CTGGCCGAGT TGATGGATCG CGGCATCGAA ATTCTCGACA ACCTCGAACA GTACGAACTG
GTCTGTCTGG ACGACTTGCA GGTGATTGCC GGCAAGGCGG ACTGGGAAGA GGCAATGTTT
CATCTGTTCA ACCGTCTGCG TGACAGCGGT CGGCGTCTGC TGATTGCGGC GTCCACTTCA
CCCCGTGAAC TGCCGATCAA ACTGGCTGAC CTGAAATCAC GGCTGACCCT GGCGCTGATC
TTCCAGATGC GTCCGCTCTC CGACGAAGAC AAATTGCGTG CCCTGCAACT GCGTGCTTCA
CGTCGCGGTC TGCACCTGAC TGACGAGGTT GGGCATTTTA TTTTGACTCG CGGTACCCGC
AGTATGAGCG CGCTTTTCGA TCTGCTGGAG CAGCTCGATC AGGCCTCTTT GCAGGCTCAG
CGCAAGCTGA CCATTCCCTT CCTGAAAGAA ACCCTGGGCT GGTAA
 
Protein sequence
MKPIQLPLGV RLRDDATFIN YYPGANAAAL GYVERLCEAD AGWTESLIYL WGKHGVGRTH 
LLQAACLRFE QMGEPAVYLP LAELMDRGIE ILDNLEQYEL VCLDDLQVIA GKADWEEAMF
HLFNRLRDSG RRLLIAASTS PRELPIKLAD LKSRLTLALI FQMRPLSDED KLRALQLRAS
RRGLHLTDEV GHFILTRGTR SMSALFDLLE QLDQASLQAQ RKLTIPFLKE TLGW