Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1627 |
Symbol | |
ID | 3716839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1818083 |
End bp | 1818973 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Pirin-like |
Protein accession | YP_347359 |
Protein GI | 77457854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0199876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC AACCCCTGAT CATCCGCCCG CGCGCCGAAG ACGTCGAAGG CCAGCCGATT CTGCGCCCGC TGCCGTCAGC CAAATGCCGC AGCGTCGGAC CTTTCGTGTT TTTCGACCAC ATGCTCGAAA CGGTTTATCC GGCGGGCAAA GGCATGAACA TCCGACAGCA TCCGCACATC GGTCTGTCGA CCCTTACGTA TTTGTTCGAC GGGCAGATCC AGCACAAGGA CAGCCTGGGT TCGGATCAGG TGGTCAGCGC CGGCGATGTC AGCTGGATGA CTGCCGGCAC GGCGATCGCT CACGTCGAGC GCACGCCCGA ACCGCTGTGG GAACAATGCT TCAAGATGCA CGGCCTGCAA ATCTGGCTCG CCTCGCCCAG GGATCACGAA CAAGGCCCGG GGCATTACAG CCACCACCCG GCCTCGACCT TGCCGGTCAG CGATAACCTC GGTGTACAGA TCCGCATGAT CGCCGGGTCA GGCTTTTGCC TGGAATCGCC GGTGCCGGTG CTTTCTCCTA CGCTGTATGC CGAATTGAAG ATGCAAACCG CGACCACACT GCTGATCCCG ACCGAGCATG AAGAGCGGGC GCTGTACGTG TTGAGTGGTG ATGTGCAATT GAATGGCGAA GCGGTCGAAC CCCATGCGCT GGTAGTGTTG CCGGCCGGGG AAGAGATGAG CCTGTTCGCC GAAAGCGACA GCCACGCGGT GTTGTTCGGT GGTGCGCCAC TGGACGGGCC ACGGCGGATC AACTGGAACT TTGTCGCGAG CGATCCGGCG GCGATCGATG AGGCGCGGCG CAAGTGGGCG GCCGGGGACT GGCCGACGGT GCCGGGGGAA GTCGAGCGGA TCGAACTGCC TAAATCGCGC AGCGAGCCGA CGCCGCTGTA A
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Protein sequence | MDTQPLIIRP RAEDVEGQPI LRPLPSAKCR SVGPFVFFDH MLETVYPAGK GMNIRQHPHI GLSTLTYLFD GQIQHKDSLG SDQVVSAGDV SWMTAGTAIA HVERTPEPLW EQCFKMHGLQ IWLASPRDHE QGPGHYSHHP ASTLPVSDNL GVQIRMIAGS GFCLESPVPV LSPTLYAELK MQTATTLLIP TEHEERALYV LSGDVQLNGE AVEPHALVVL PAGEEMSLFA ESDSHAVLFG GAPLDGPRRI NWNFVASDPA AIDEARRKWA AGDWPTVPGE VERIELPKSR SEPTPL
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