Gene Pfl01_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1623 
Symbol 
ID3716835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1814273 
End bp1814809 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID 
Productphenylacetic acid degradation-like protein 
Protein accessionYP_347355 
Protein GI77457850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.866187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0463589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTT TGCTGTTCTT TCCACTACCG GGAACAGCGA CTAACAAGAG TAATTATCAA 
ATGGCCGAAA ACCCCGTTTT TGAGCGTGCG ACATGGTTTC TCTCGGCCCT GCGTCACTGT
CAGGTACTGG GATTGAAAGT GCACAGCGCC AGCCACGAAG GCCTGACGGT GGTGCTGCCG
TACAGTGCGC AGATCGTCGG CAACCCGCTG ACCGGCGTGG TCCACGGCGG GGCGATCACT
TCGCTGATGG ACACTGCATG CGGCATGTCG ACCCTGTGCG TGCTGCCGGA ATTCGAAGTC
TGCCCGACCC TCGATCTGCG CATCGACTAC ATGCACGCCG CCGAGCCACA TAAAGACGTG
TTTGGCTTCG CCCAATGTTA TCGGGTCACC ACCGATGTGA TCTTCGCTCG CGGTTTTGCC
TATCAGGATG ATCCCGAGCA GCCGATTGCC CATGTCGTCG GCACCTTCAT GCGCATGGGC
AAAGGCCTTA AAGGCACGAA AGGCTTTGGT GGCGCGATCA AGGGAGAAAG CCCATGA
 
Protein sequence
MELLLFFPLP GTATNKSNYQ MAENPVFERA TWFLSALRHC QVLGLKVHSA SHEGLTVVLP 
YSAQIVGNPL TGVVHGGAIT SLMDTACGMS TLCVLPEFEV CPTLDLRIDY MHAAEPHKDV
FGFAQCYRVT TDVIFARGFA YQDDPEQPIA HVVGTFMRMG KGLKGTKGFG GAIKGESP