Gene Pfl01_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1620 
Symbol 
ID3716832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1812722 
End bp1813459 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347352 
Protein GI77457847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.54156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0572625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTCA TCCAAGCCAA CCTGATCCAT CTGCTGGCCG CGCTCTGGTT TGTCATCTGC 
TGGGGCGGTT ACACCCGTTA TGCCACCTGG AAGGGCCGTG ACACCGCGTG CCTGGCCAGC
GTGCTGCACC TGTACCGCGA AGACTGGATG CGCCGCATGC TGCTGCGTGA CAACCGTATC
GCCGACGCTA GCGTGATCGG CAACCTTGAA CGCAACGCCT CGTTCTTCGC CTCCAGCACA
CTGATTATCC TGGCGGGCAT CCTGACCGTG CTCGGTGCTT CCGAGCGCGC GGTGTCGCTG
CTGGCAGACA TTCCGATGGT GCAACAGGCC TCGCAGGGGA TGTCGGAGAT CAAGTTGCTG
TGCCTGGCGC TGGTGTTCGT CTACGCCTTC TTCACCTTCA GCTGGTGCAT GCGCCAATAC
AACTTCGCCG CCATTCTGGT CGGCTCGGCC CCGATGATCG GTGAGCGGCA GGTCTCGGAG
CAGGAGCGCA AGGCGTTCGC CTCGCGGGCG GCGCGGGTGA TTTCGATGGC GGCCAACCAG
TTCAACTTCG GTCTGCGCTC CTATTACTTC GGGATGAGCA TGCTGGCGTG GTTCGTCAGC
CCGTGGCTGT TCATGTTGAT GAGCGCAGGC GTGGTGCTGG TGTTGTATCG CCGGGAGTTT
CATTCCGACG TGCTCGATGT AATGGTCTAT ACCCCTACAG AGGCGCCATT GCCCGAAGCG
AACAAAGAGG CTGCTTGA
 
Protein sequence
MSFIQANLIH LLAALWFVIC WGGYTRYATW KGRDTACLAS VLHLYREDWM RRMLLRDNRI 
ADASVIGNLE RNASFFASST LIILAGILTV LGASERAVSL LADIPMVQQA SQGMSEIKLL
CLALVFVYAF FTFSWCMRQY NFAAILVGSA PMIGERQVSE QERKAFASRA ARVISMAANQ
FNFGLRSYYF GMSMLAWFVS PWLFMLMSAG VVLVLYRREF HSDVLDVMVY TPTEAPLPEA
NKEAA