| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1612 |
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| Symbol | sdhA |
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| ID | 3716824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1800303 |
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| End bp | 1802075 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_347344 |
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| Protein GI | 77457839 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.244863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACA TTCCAACGAT TTCTTTCGAC GCCATCATTA TTGGTGGCGG CGGTGCCGGC
ATGCGCGCAG CGCTGCAACT GGCACAGGGC GGTCACAAGA CTGCCGTGAT CACCAAGGTT
TTCCCGACCC GTTCGCACAC TGTGTCCGCA CAGGGCGGGA TCACCTGCGC CATCGCTTCG
GCCGACCCGA ACGATGACTG GCGCTGGCAC ATGTACGATA CCGTCAAGGG TTCCGACTAC
ATCGGTGACC AGGACGCTAT CGAATACATG TGTCAGGAAG GCCCGGCTGC CGTTTTCGAG
CTGGACCACA TGGGTCTGCC GTTCTCGCGT ACCGAGCAAG GCCGTATCTA CCAGCGTCCG
TTCGGCGGTC AGTCGAAGGA TTACGGTAAA GGCGGGCAGG CTGCCCGCAC CTGCGCCGCT
TCCGACCGTA CCGGTCACGC GCTGCTGCAC ACCCTTTATC AGGGCAACCT GAAAGCCGGT
ACCACGTTCC TGAACGAGTA CTACGCTGTC GACCTGGTGA AAAACCAGGA AGGCGAATTC
GTCGGTGTGA TCGCGATCTG CATCGAAACC GGCGAAACCA CCTACATCCG CGCCAAAGCC
ACCGTACTGG CTACCGGCGG TGCAGGTCGT ATCTATGCAT CCACCACCAA CGCCCTGATC
AACACCGGTG ACGGCGTCGG CATGGCTCTG CGTGCTGGCG TGCCGGTACA AGACATCGAA
ATGTGGCAGT TCCACCCGAC CGGCATCGCC GGCGCCGGTG TACTGGTGAC CGAAGGTTGC
CGTGGTGAAG GTGGTTACCT GATCAACAAG CACGGCGAGC GTTTCATGGA GCGTTATGCT
CCGAACGCCA AAGACCTTGC CGGTCGTGAC GTGGTTGCCC GTTCGATGGT TAAAGAGATC
ATCGCCGGTA ATGGTTGCGG TCCGAATGGC GACCACGTGA TGCTCAAACT CGACCACCTG
GGCGAGGAAG TGCTGCACAG CCGTCTGCCA GGCATCTGCG AACTGTCGAA GACTTTCGCA
CACGTTGATC CGGTGGTTGC TCCGGTTCCG GTTGTTCCGA CTTGCCACTA CATGATGGGC
GGCGTTGCCA CCAACATTCA TGGCCAGGCG ATCACCCAGG ACGCCGAAGG CGTGGATCAG
ATCATTCCTG GTCTGTTCGC GGTAGGTGAA GTGGCTTGCG TATCGGTTCA CGGTGCCAAC
CGTCTGGGCG GCAACTCGCT GCTCGACCTG GTGGTATTCG GCCGCGCTGC CGGCCTGCAC
CTGGAGAAGG CGCTGACCGA CGGCATCGAA TACGACGACG CTACCGAAGC CGACATCGAA
GCTGCCCTGG CACGTCTGAA CGCCCTGAAC AACCGTACCG ACGGCGAAGA CGTCGCTACC
CTGCGTCGCG AGCTGCAAAG CTGCATGCAG AACTACTTCG GTGTATTCCG TACCGGCGAA
TACATGCAGA AGGGTATTGC CCAGCTGGCC GATCTGCGCA AGCGCATCGC CAACGTGAAG
ATCAACGACA AGTCGCAGGC GTTCAACACT GCCCGTATCG AAGCGCTGGA ACTGCAAAAC
CTGCTGGAAG TGGCTGAAGC TACCGCCATC GCTGCCGAAG TACGTAAAGA GTCCCGCGGT
GCTCACGCCC GTGAAGACTT CGAAGATCGT GACGACGAAA ACTGGCTGTG CCACACCCTG
TACTTCCCGG GTGAGAAACG CGTCGCCAAG CGTGCCGTGA ACTTCTCGCC GAAGACTGTT
CCGACTTTCG AACCTAAAGT CCGGACTTAT TAA
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| Protein sequence | MANIPTISFD AIIIGGGGAG MRAALQLAQG GHKTAVITKV FPTRSHTVSA QGGITCAIAS
ADPNDDWRWH MYDTVKGSDY IGDQDAIEYM CQEGPAAVFE LDHMGLPFSR TEQGRIYQRP
FGGQSKDYGK GGQAARTCAA SDRTGHALLH TLYQGNLKAG TTFLNEYYAV DLVKNQEGEF
VGVIAICIET GETTYIRAKA TVLATGGAGR IYASTTNALI NTGDGVGMAL RAGVPVQDIE
MWQFHPTGIA GAGVLVTEGC RGEGGYLINK HGERFMERYA PNAKDLAGRD VVARSMVKEI
IAGNGCGPNG DHVMLKLDHL GEEVLHSRLP GICELSKTFA HVDPVVAPVP VVPTCHYMMG
GVATNIHGQA ITQDAEGVDQ IIPGLFAVGE VACVSVHGAN RLGGNSLLDL VVFGRAAGLH
LEKALTDGIE YDDATEADIE AALARLNALN NRTDGEDVAT LRRELQSCMQ NYFGVFRTGE
YMQKGIAQLA DLRKRIANVK INDKSQAFNT ARIEALELQN LLEVAEATAI AAEVRKESRG
AHAREDFEDR DDENWLCHTL YFPGEKRVAK RAVNFSPKTV PTFEPKVRTY
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