Gene Pfl01_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1611 
Symbol 
ID3716823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1799931 
End bp1800299 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content59% 
IMG OID 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_347343 
Protein GI77457838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.807024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACCA GCGTTACAAA CCTTTCGCGT TCGGGCCTCT ATGACTGGAT GGCGCAGCGT 
GTGTCTGCGG TCGTTCTCGC GGCTTATTTC ATATTCCTGA TCGGCTACCT CGCCGCGAAC
CCGGGCATTG GCTACGACCA ATGGCACGGC CTGTTCGCCC ACAACGGAAT GCGTATCTTC
AGTCTGCTGG CACTGGTTGC CCTGGGCGCT CACGCCTGGG TCGGCATGTG GACCATCGCG
ACCGACTACC TGACGCCAAT GGCGCTGGGC AAGTCCGCGA CTGCAGTACG TTTCCTTTTC
CAGGCAGTAT GCGGCGTCGC GATGTTCGCT TACTTCGTCT GGGGTGTGCA GATTCTCTGG
GGTATCTGA
 
Protein sequence
MVTSVTNLSR SGLYDWMAQR VSAVVLAAYF IFLIGYLAAN PGIGYDQWHG LFAHNGMRIF 
SLLALVALGA HAWVGMWTIA TDYLTPMALG KSATAVRFLF QAVCGVAMFA YFVWGVQILW
GI