Gene Pfl01_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1602 
Symbol 
ID3716912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1789237 
End bp1790025 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID 
ProductVacJ-like lipoprotein 
Protein accessionYP_347334 
Protein GI77457829 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.4421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.6169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAAT ATCTCCTGCT GATTGCAGCG CTCCTCAGTG CAGGTATGGC CCAGGCCGAC 
AACAGCAAAG CCAATGCACC GGTGGTCATC GACAGCGACG GCTTCAAGGA GCCGCTGTCC
AAACTCAAAT TCAACCCGGG GCTGGATCAG CGCGAGTTCG AGCGCTCGAC CCTCAGCGCG
CTGAACGTCT ACGACCCGCT GGAAGAGTGG AACCGCCGCG TCTACCACTT CAACTACCGC
TTCGACCAAT GGGTGTTCCT GCCGGTGGTC GATGGCTATC GCTACATCAC CCCGAGCTTC
GTGCGCACCG GCGTGAGCAA CTTCTTCAAC AACATTGGCG ACGTGCCGAA CCTGGTCAAC
AGCCTGTTGC AGTTCAAGGG CAAGCGCTCG ATGGAAACCA CCGCGCGCCT GCTGCTCAAC
ACCACTATCG GCATCGCCGG GCTCTGGGAT CCGGCCACCG CCATGGGCCT GCCGCGCCAG
AACGAAGACT TCGGCCAGAC CCTGGGCTTC TATGGCGTGC CGGGCGGTGC TTACTTCGTG
CTGCCAATCC TCGGCCCGTC GAACCTGCGC GATACCGCAG GTCTGGCCGT GGACTACACC
GCCGAGTCCG CGATCAACTT CCTCAACGTC TCGGAAGTCA GCTCCAACCA TCCGGAAGTC
TGGGTACTGC GCGGCGTCGA CAAGCGTTAC CAGACCAGCT TCCGCTACGG CCAGCTGAAC
TCACCGTTCG AGTACGAGAA GGTGCGCTAC GTCTACACCG AGTCGCGCAA GTTGCAGATC
GCCGAGTAA
 
Protein sequence
MAKYLLLIAA LLSAGMAQAD NSKANAPVVI DSDGFKEPLS KLKFNPGLDQ REFERSTLSA 
LNVYDPLEEW NRRVYHFNYR FDQWVFLPVV DGYRYITPSF VRTGVSNFFN NIGDVPNLVN
SLLQFKGKRS METTARLLLN TTIGIAGLWD PATAMGLPRQ NEDFGQTLGF YGVPGGAYFV
LPILGPSNLR DTAGLAVDYT AESAINFLNV SEVSSNHPEV WVLRGVDKRY QTSFRYGQLN
SPFEYEKVRY VYTESRKLQI AE