Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1602 |
Symbol | |
ID | 3716912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1789237 |
End bp | 1790025 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | VacJ-like lipoprotein |
Protein accession | YP_347334 |
Protein GI | 77457829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.4421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.6169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAAT ATCTCCTGCT GATTGCAGCG CTCCTCAGTG CAGGTATGGC CCAGGCCGAC AACAGCAAAG CCAATGCACC GGTGGTCATC GACAGCGACG GCTTCAAGGA GCCGCTGTCC AAACTCAAAT TCAACCCGGG GCTGGATCAG CGCGAGTTCG AGCGCTCGAC CCTCAGCGCG CTGAACGTCT ACGACCCGCT GGAAGAGTGG AACCGCCGCG TCTACCACTT CAACTACCGC TTCGACCAAT GGGTGTTCCT GCCGGTGGTC GATGGCTATC GCTACATCAC CCCGAGCTTC GTGCGCACCG GCGTGAGCAA CTTCTTCAAC AACATTGGCG ACGTGCCGAA CCTGGTCAAC AGCCTGTTGC AGTTCAAGGG CAAGCGCTCG ATGGAAACCA CCGCGCGCCT GCTGCTCAAC ACCACTATCG GCATCGCCGG GCTCTGGGAT CCGGCCACCG CCATGGGCCT GCCGCGCCAG AACGAAGACT TCGGCCAGAC CCTGGGCTTC TATGGCGTGC CGGGCGGTGC TTACTTCGTG CTGCCAATCC TCGGCCCGTC GAACCTGCGC GATACCGCAG GTCTGGCCGT GGACTACACC GCCGAGTCCG CGATCAACTT CCTCAACGTC TCGGAAGTCA GCTCCAACCA TCCGGAAGTC TGGGTACTGC GCGGCGTCGA CAAGCGTTAC CAGACCAGCT TCCGCTACGG CCAGCTGAAC TCACCGTTCG AGTACGAGAA GGTGCGCTAC GTCTACACCG AGTCGCGCAA GTTGCAGATC GCCGAGTAA
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Protein sequence | MAKYLLLIAA LLSAGMAQAD NSKANAPVVI DSDGFKEPLS KLKFNPGLDQ REFERSTLSA LNVYDPLEEW NRRVYHFNYR FDQWVFLPVV DGYRYITPSF VRTGVSNFFN NIGDVPNLVN SLLQFKGKRS METTARLLLN TTIGIAGLWD PATAMGLPRQ NEDFGQTLGF YGVPGGAYFV LPILGPSNLR DTAGLAVDYT AESAINFLNV SEVSSNHPEV WVLRGVDKRY QTSFRYGQLN SPFEYEKVRY VYTESRKLQI AE
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