Gene Pfl01_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1571 
Symbol 
ID3716939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1761199 
End bp1762152 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID 
ProductCheW protein 
Protein accessionYP_347303 
Protein GI77457798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.99203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.715564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGC CGATCAAGCT GACGTCGAAG CCGCAACTGG CGCTGCAGTC CTATCTGGAC 
GGCTTGCTGC AGGAAGTGAC GGACGAGGTC GAGCAACCAG TCGTGGCGCC GGTCGAGGTG
GTCGAGACCA CTGCGGCACT CGATGAATTC CAGGCTGCCG TGCTTGAAGA GCAGGCCCGG
GATGCGCAAA AAGCCGCCCG GCCGATCGTC CCGGTTGCAG CGCCTGCCGC TGTGGCGGCC
AAAGCGCCCG CGACCCTGAT CAAAGAGCCT GAGCCGGTGC GCGTGGTCTC GACGCTGGCA
CCGCTGTTGC AAACCCAACT TCTGCAAACG CCTCCGGTTC CGGCGGCGCC AGAACCCGAG
CCTGTAGCGC CTGCGCCAGC GCCGGTCGAA CCAACCCTGG TTGCGCCGCT GGTGGAAGTG
CATCTGCCGC CCAGCAACAC GCCGCCACCG GTAGAAACCG ACGGTCGTCC GGCCTGGGCT
TCGGAAGCGT TCGAATGCCT GCTGTTCGAC GTCGCCGGGT TGACGCTGGC GGTGCCGCTG
GTGTGCCTGG GGTCGATCTA TTCGCTGGCC GGCCATGAGC TGACGCCGCT GTTCGGTCAG
CCGGAATGGT TCCTCGGGAT TCTGCCGAGC CAGGCCGGAA ATCTGAAGGT GCTGGACACC
GCACGCTGGG TCATGCCGGA CCGTTATCGC GACGATTTCC GTCAGGGTCT GCAATACGTG
ATTTCGGTTC AGGGTTACGA GTGGGGCCTG GCGGTGCATC AGGTCAGTCG CTCGTTGCGC
CTGGACCCGA ATGAAATCAA ATGGAGAAGT CACCGGGGTC AGCGGCCATG GCTCGCCGGC
ACGGTGATTG AACACATGTG CGCCTTGCTC GATGTTTCCG CACTGGCCGA GTTGATCGCC
AGCGGTGGGG CAAAGCACAT GTCCGGCAGT AAGCCGAACC ACAAACCGAC ATAA
 
Protein sequence
MNRPIKLTSK PQLALQSYLD GLLQEVTDEV EQPVVAPVEV VETTAALDEF QAAVLEEQAR 
DAQKAARPIV PVAAPAAVAA KAPATLIKEP EPVRVVSTLA PLLQTQLLQT PPVPAAPEPE
PVAPAPAPVE PTLVAPLVEV HLPPSNTPPP VETDGRPAWA SEAFECLLFD VAGLTLAVPL
VCLGSIYSLA GHELTPLFGQ PEWFLGILPS QAGNLKVLDT ARWVMPDRYR DDFRQGLQYV
ISVQGYEWGL AVHQVSRSLR LDPNEIKWRS HRGQRPWLAG TVIEHMCALL DVSALAELIA
SGGAKHMSGS KPNHKPT