Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1569 |
Symbol | |
ID | 3716937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1759474 |
End bp | 1760364 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | flagellar motor protein MotD |
Protein accession | YP_347301 |
Protein GI | 77457796 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.474661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.720307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTC GTCGCCAGCA TGAAGAGCAC GTAAACCATG AACGTTGGCT GGTTTCCTAC GCCGACTTCA TCACCTTGCT CTTTGCCTTT TTCGTGGTGA TGTACTCCAT CTCGTCGATC AACGAAGGCA AGTACAAGAT CATCTCCGAA GCGCTGATCG GGGTCTTCAC CGACTCCGAC CGCGCGCTCA AGCCGATCCC GATCGGTGAA GAACGACCGA AGACCGTGAC CCCGGCCAAG CCGCTGGTCA AGGACGCCGA ACAGGTTGAC GCCGGCATCG CCGGGGCCAG CGATCCGTTG AAAAGCATCG CCGATGACAT CAGTGCCGCG TTCGGCGACC TGATCTCCTC GAACCAGATG ACCGTGCGCG GCAACGAGCT GTGGGTCGAG ATCGAACTCA ACTCCAGCCT GTTGTTCGGC AGCGGTGATG CGATGCCGAG CGACATCGCG TTCAACATCA TCGACAAGGT CGCAGCGATC CTCAAACCGT TCGACAACCC GATCCACGTC GAAGGTTTCA CCGACGATCA ACCGATCCGC ACCGCGCAGT ACCCGACCAA TTGGGAACTG TCCTCGGCGC GTTCGGCGAG CATCGTGCGC ATGTTGGCCA TGCAGGGTGT GAACCCTGGC CGCCTGGCCT CGGTGGGCTA CGGCGAATTC CAGCCGGTGG CCAACAACGC CACCGCCGAA GGTCGGGCGA AGAACCGTCG CGTGGTGCTG GTGGTGTCGC GCAATCTGGA TGTTCGTCGC AGCCTGACCG GCACCGGAAC CGCCCATGCG CAACCGGATG CCGCGTTGAA GCGTGCTGGC ACACAAACTG CACCGACCCC GGTCAAGACG CCGGGACGCG AGAGTGCCGT CAATTCTCCG TCGCCCGCAT TAATACGCTG A
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Protein sequence | MARRRQHEEH VNHERWLVSY ADFITLLFAF FVVMYSISSI NEGKYKIISE ALIGVFTDSD RALKPIPIGE ERPKTVTPAK PLVKDAEQVD AGIAGASDPL KSIADDISAA FGDLISSNQM TVRGNELWVE IELNSSLLFG SGDAMPSDIA FNIIDKVAAI LKPFDNPIHV EGFTDDQPIR TAQYPTNWEL SSARSASIVR MLAMQGVNPG RLASVGYGEF QPVANNATAE GRAKNRRVVL VVSRNLDVRR SLTGTGTAHA QPDAALKRAG TQTAPTPVKT PGRESAVNSP SPALIR
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