Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1561 |
Symbol | flhF |
ID | 3716986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1750865 |
End bp | 1752205 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | flagellar biosynthesis regulator FlhF |
Protein accession | YP_347293 |
Protein GI | 77457788 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.37144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.111794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGTTA AGCGTTTTTT CGCCGCCGAT ATGCGTCAGG CCATGAAGCT GGTTCGTGAT GAGCTGGGCG CTGATGCCGC CATCATTGGC AACCGCCGCA TCGCCGGCGG CGTCGAGCTG ACGGCGGCGC TCGATTACAA ACTGTCTGCG CTGGCCCCGC GCGTTCCGAA CATGGAACTC GAGGATGAGC TGCGCAAGAC CCAGTCGCGC ATCGTCACCG CCCAGGCCGA GCTGAGCCTG CGTGGCGAAG CCGACGGCAA CACCAATCGC CAGTTGTTCG CCGGGCTGCC GTTGACGGCC GGCCTGCCGC TGACCGCTGC CGAGCCGCTG ACCGAACCGA CCTACGAAGC TCCGGCTCGT CCGGCACCAG CGCCTGCAGC GGTTTCCGCT GGCGTCGATC CGCGTGCTCT GGACTCGATG CGTTTCGAAC TCAACAGCCT GCGCGAACTG ATGGAAGTGC AACTCGGCAC CCTGGCCTGG AACCAGCTGC AAGGCAGCCG CCCGGCCCAG GCCAATCTGT ACCGTCGTCT GCAACGCATC GGTTTGTCCG GCCCGTTGTC CCGTGATCTG CTGTCGATGA TCACCGAGAT CGACGAACCG CGTCAGGCCT GGCGCATGCT GCTGGCGCAC CTGGCGCGGA TGATTGCCGT GCCGGAAGTC GAGCCGCTGG AAGAGGGCGG GGTGATTGCG ATGGTCGGTC CTGCCGGCAT GGGCAAGACC ACCACCCTGG CCAAGCTGGC CGCCCGCTAC GTGCTCAAGT ACGGCGCGCA GAACATCGCG CTGGTGAGCA TGGACAGTTT CCGTATCGGC GCGCAGGAGC AGCTCAAGAC GCTGGGCCGC ATCCTCAATG TGTCGGTGAC CCACGTCGAT CCGGGCCAGT CCCTGGTGCA GGCGCTGGAT CCACTGCTGC GCAAGCGCGT GGTGCTGATT GACACCGCCG GCCTGCAGGC CAGCGATCCG GCCCTGCGCA TGCAGCTGGA AAGTCTGGCC GGTCGTGGCA TTCGGTCAAA AAATTATCTG GTTCTGGCAA CCACCAGCCA AAAACAGGTT CTAACCGCCG CTTATCACAG TTACAAGCGT TGCGGGCTGG CCGGCTGCAT CCTGACTAAA CTGGATGAGA CGGCCAGTCT GGGCGAAGTG TTGAGTCTGG CGATCAGTCA CGAACTGCCG GTTGCCTACC TGACCGATGG CCCACGGATT CCGGATGATC TGCATCTGCC GCGGCGTCAT CAACTGGTCA GTCGCGCCGT CAGCGTGCAA ATGCAGGAAG AACCCAGCGA AGAAGCCATG GCTGACATGT TCGCTGATAT CTACCACAGT CCGACCAAGC AGGTTGGCTG A
|
Protein sequence | MQVKRFFAAD MRQAMKLVRD ELGADAAIIG NRRIAGGVEL TAALDYKLSA LAPRVPNMEL EDELRKTQSR IVTAQAELSL RGEADGNTNR QLFAGLPLTA GLPLTAAEPL TEPTYEAPAR PAPAPAAVSA GVDPRALDSM RFELNSLREL MEVQLGTLAW NQLQGSRPAQ ANLYRRLQRI GLSGPLSRDL LSMITEIDEP RQAWRMLLAH LARMIAVPEV EPLEEGGVIA MVGPAGMGKT TTLAKLAARY VLKYGAQNIA LVSMDSFRIG AQEQLKTLGR ILNVSVTHVD PGQSLVQALD PLLRKRVVLI DTAGLQASDP ALRMQLESLA GRGIRSKNYL VLATTSQKQV LTAAYHSYKR CGLAGCILTK LDETASLGEV LSLAISHELP VAYLTDGPRI PDDLHLPRRH QLVSRAVSVQ MQEEPSEEAM ADMFADIYHS PTKQVG
|
| |