Gene Pfl01_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1548 
Symbol 
ID3717012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1736075 
End bp1736512 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_347280 
Protein GI77457775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0633784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.54306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCGGTC TGGCGCTGGC GTTGCCGTTC AGCGTGCTGG CGGCCGAGCC GGTGGCGACC 
ACCGCGGCGG CTGCTGCGCC AGCCGTCAAC AGCGGCGTGG CCGGTCAGCT GACGCAACTG
GTGCTGGGTC TGTTACTGGT GCTGGGGTTG ATCTTCTTCC TCGCCTGGTT GCTGCGCCGG
GTGCAGCAGG CCGGCCCCGC CGGCAAGGGC CAGGTGATCG AGTTGATCGG TTCCCGCGCG
CTCGGGCCAC GTGACCGTCT GATGCTGGTG CAGGTCGGCA ACGAGCAGAT TCTGCTCGGC
CTCAGCCCCG GAACCATCAC TGCGTTGCAC GTGCTCAAAG AGCCGGTCGA GGTGCCGAGC
GCCGCCGACA AAGCGACTCC GGAATTTGCC CAGCATCTGT TGAAGATCCT CGGCAAGGAT
CAGAAGGATA AGAAGTAA
 
Protein sequence
MFGLALALPF SVLAAEPVAT TAAAAAPAVN SGVAGQLTQL VLGLLLVLGL IFFLAWLLRR 
VQQAGPAGKG QVIELIGSRA LGPRDRLMLV QVGNEQILLG LSPGTITALH VLKEPVEVPS
AADKATPEFA QHLLKILGKD QKDKK