| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1532 |
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| Symbol | |
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| ID | 3716996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1719720 |
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| End bp | 1721195 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_347264 |
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| Protein GI | 77457759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.497768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGTG AAACCAAAAT TCTGCTGATC GATGACGATA GCGTCCGCCG CCGCGACCTG
GCGGTGATTT TAAATTTTCT TGGCGAAGAA AATTTACCCT GCGGAAGCCA TGACTGGCAG
CAGGCAGTCG GCTCTTTGTC GTCTAGTCGT GAGGTCATTT GCGTACTGAT CGGGACGGTC
AATGCTCCTG GTGCGCTTTT GGGCTTGCTA AAGACACTCT CAACCTGGGA TGAGTTCCTT
CCGGTTTTGC TGATGGGCGA TAATTCTTCG GTGGACCTGC CCGAAGACCA GCGCCGCCGG
GTGCTTTCGA CCCTCGAAAT GCCGCCGAGC TACAGCAAGC TGCTCGACTC CCTGCACCGT
GCCCAGGTCT ATCGCGAGAT GTACGACCAG GCCCGCGAAC GCGGCCGTCA TCGCGAACCC
AACCTTTTCC GCAGTCTCGT CGGCACCAGT CGCGCGATCC AGCACGTGCG CCAGATGATG
CAGCAAGTGG CCGACACCGA TGCCAGCGTG CTGATCCTCG GCGAGTCCGG GACCGGCAAG
GAAGTGGTTG CGCGCAACCT GCATTACCAT TCCAAGCGTC GTGACGCGCC ATTCGTACCG
GTCAACTGCG GGGCGATCCC GGCCGAGTTG CTGGAAAGCG AACTGTTCGG CCACGAGAAG
GGCGCCTTTA CCGGCGCTAT CACCAGCCGT GCCGGCCGCT TCGAGCTGGC CAACGGCGGT
ACGCTGTTCC TCGACGAAAT CGGCGACATG CCGCTGCCGA TGCAGGTCAA GCTGCTGCGC
GTGCTGCAGG AGCGCACCTT CGAGCGTGTG GGCAGCAACA AGACCCAGAG CGTCGACGTG
CGCATCATCG CCGCGACCCA CAAGAATCTC GAAAGCATGA TCGAGATCGG CACCTTCCGC
GAAGACCTCT ACTATCGCCT GAACGTGTTC CCGATCGAGA TGGCGCCGCT GCGTGAGCGC
GTCGAAGACA TTCCGCTGCT GATGAACGAG CTGATCTCGC GCATGGAGCA CGAGAAGCGC
GGTTCGATCC GCTTCAACTC TGCCGCGATC ATGTCCCTGT GCCGCCACGG CTGGCCGGGC
AACGTCCGCG AGCTGGCCAA CCTGGTGGAG CGCATGGCGA TCATGCATCC TTACGGGGTG
ATCGGCGTGG TCGAGCTGCC GAAGAAATTC CGCTACGTCG ACGACGAAGA CGAGCAAATG
GTCGACAGCC TGCGCAGCGA TCTGGAAGAG CGCGTGGCGA TCAACGGCCA TACGCCGGAC
TTCACCGCCA ACGCCATGCT GCCGCCGGAA GGTCTCGACC TGAAGGACTA CCTCGGTGGT
CTGGAGCAGG GGCTGATCCA GCAGGCGCTG GACGACGCCA ACGGCATCGT GGCCCGTGCC
GCCGAACGCC TGCGTATTCG CCGCACCACG CTGGTGGAGA AGATGCGCAA GTACGGCATG
AGCCGCCGTG AAGGAGATGA ACAGGCGGAT GATTGA
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| Protein sequence | MWRETKILLI DDDSVRRRDL AVILNFLGEE NLPCGSHDWQ QAVGSLSSSR EVICVLIGTV
NAPGALLGLL KTLSTWDEFL PVLLMGDNSS VDLPEDQRRR VLSTLEMPPS YSKLLDSLHR
AQVYREMYDQ ARERGRHREP NLFRSLVGTS RAIQHVRQMM QQVADTDASV LILGESGTGK
EVVARNLHYH SKRRDAPFVP VNCGAIPAEL LESELFGHEK GAFTGAITSR AGRFELANGG
TLFLDEIGDM PLPMQVKLLR VLQERTFERV GSNKTQSVDV RIIAATHKNL ESMIEIGTFR
EDLYYRLNVF PIEMAPLRER VEDIPLLMNE LISRMEHEKR GSIRFNSAAI MSLCRHGWPG
NVRELANLVE RMAIMHPYGV IGVVELPKKF RYVDDEDEQM VDSLRSDLEE RVAINGHTPD
FTANAMLPPE GLDLKDYLGG LEQGLIQQAL DDANGIVARA AERLRIRRTT LVEKMRKYGM
SRREGDEQAD D
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