Gene Pfl01_1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1525 
Symbol 
ID3717028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1714093 
End bp1715385 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347257 
Protein GI77457752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT TTTTCCAGGC CAATGCTGAA GTCATCGAAC GACGCTGGCC GGCGCTGTTC 
GCGAGATTGC TGAACGAAGA CGGTTCGGCG ATCGAGGCTG AGCTGACGCA AGGGCTGGGC
TCGACGCTGA GCATTGGCGG CATTCAGCTC ACCAGCCGGC ATGACCGTGT CCGCGAGGCG
CAGATTCAGG CCGCCAGCCT GCCGGCGGAC AAGCCGCAAC TGCATGTCTA CGGCACCGGC
CTCGGGGATT TGCCCACGGT GTTGCTGGAG CGCACCGGGC TTGAGCGACT TTACGTACAC
ATCCTCAATG GCGCGCTGTT CGCCCTGGTG CTGCAATTGA TCGATCAGCG TCAGTGGCTG
CAGGATCCGC GAGTTGAATT GCTCTACGCC GGCGACCTGC CCGACATCTG CACGCCGTTT
TTTGCATTGC CTGCCGAGAT GCTGTTGGCC GATGACTTCA ACGCAAAGAT TCGCGATCGG
CTGGTCAGCG AAGTGCACCT GAGCTTCAAC AACCGCGAGT TCGATCCGCA GTCACCGTTC
ATTCAACAGC GTCTGCAGGA CTGCTTGCCG GTATTGCTGG CTGACGATGA TGTGGCGACG
CTGTTCGGCT CCTGTGCCGG TCGGGAGATT TTCGTGATTG GCACGGGGCC GACACTGGAG
CAGCATTTCG AACGTCTGGC GGTGATCCGC GAGCGGGCCG ATCGTCCGTT GTACATTTGT
GTCGATACCG CGTACCGGCC GCTGCGCGAG CACGGGATCG TGCCCGACTA TGTGGTGAGC
ATCGATCAGC GCATCAGCTT CCGGCATTTG CCTTTCGAGG ACTCCGACGG CATCCCGCTG
GTGTATCTGC CCATGAGTGA CCCCGAAGTG CTGAGGGCCT GGAAGGGCAA GCGTTATGGC
GCTTACTCTG CCAGTCCGGT CTATGCGGCA TTGCGTGAGC AGTACCCGAG GGCGCTGTTG
CATGTGGGCG GCAGCGTGAT TCACCCGGCC GTGGATCTGG CAGTGAAGAT GGGCGCTGCA
CGCATCACCC TGTTCGGCGC CGATTTTGCC TTCCCGATGA ACAAGACCCA TGCCGGCTGG
AGTGATGGTG ACCTGGGGCC GTCGGTGAAT CAGGCGCGGC ACTGGGTGCG TGACGGGTAT
GGCGAGCGCG TCAGTACCCA ACTCAATTTT CGCGGTTATC TGTGCGTGCT CGAGCGATAC
ATCGCCAGTC AGCCGCAGGT GGCGTTTTTC AACAGTAGTC GCGCGGGGGC GCAGATTGCC
GGTACAGCGT TCAATCAGGA GTTTGTGCAA TGA
 
Protein sequence
MSEFFQANAE VIERRWPALF ARLLNEDGSA IEAELTQGLG STLSIGGIQL TSRHDRVREA 
QIQAASLPAD KPQLHVYGTG LGDLPTVLLE RTGLERLYVH ILNGALFALV LQLIDQRQWL
QDPRVELLYA GDLPDICTPF FALPAEMLLA DDFNAKIRDR LVSEVHLSFN NREFDPQSPF
IQQRLQDCLP VLLADDDVAT LFGSCAGREI FVIGTGPTLE QHFERLAVIR ERADRPLYIC
VDTAYRPLRE HGIVPDYVVS IDQRISFRHL PFEDSDGIPL VYLPMSDPEV LRAWKGKRYG
AYSASPVYAA LREQYPRALL HVGGSVIHPA VDLAVKMGAA RITLFGADFA FPMNKTHAGW
SDGDLGPSVN QARHWVRDGY GERVSTQLNF RGYLCVLERY IASQPQVAFF NSSRAGAQIA
GTAFNQEFVQ