Gene Pfl01_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1523 
Symbol 
ID3717026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1711800 
End bp1712852 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content63% 
IMG OID 
ProductN-acetylneuraminate synthase 
Protein accessionYP_347255 
Protein GI77457750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.242955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTT TCAAGATCGG CAACCGTCAG ATCGGTGCCG ATGCGCCGCC GTTCATCATC 
GCGGAAATGA GCGGCAACCA TAACCAGTCG CTGGACGTAG CCCTGCAGAT TGTCGAAGCG
GCAGCAAAGG CCGGTGCGCA CGCCCTGAAG CTGCAAACCT ACACCGCCGA AACCATGACT
CTGGATCTGG CGCAAGGCGA GTTCTTCATC AAGGATCCGA ACAGTCTCTG GGCGGGCACC
TCGCTCTACG ACCTGTATGA AAAGGCCCAC ACACCCTGGG AATGGCATGC GCCGATCTTC
GCCCGGGCCA GAGAATTGGG CATGCTCGCG TTTTCCACGC CGTTCGATGA CAGCGCCGTG
GACTTTCTCG AAAGCCTCGA TGTGCCGGCC TACAAGATCG CCAGTTTCGA AAATACCGAT
CTGCCGTTGA TTCGCCGTGT CGCGGCGACC GGCAAACCGC TGATCATTTC CACCGGCATG
GCCAGCATCG CCGAACTCGA TGAAACCGTG CGCGCTGCCC GTGAGGCAGG TTGCAAGGAT
CTGGTGCTGC TCAAATGCAC CAGCACCTAC CCGGCGACGC CGCTCAACAG CCACGTGCGC
ACGATTCCGC ATCTGCGTGA GCTGTTTGGC TGCGAGGTCG GGCTGTCCGA TCACTCGATG
GGTGTAGGCG TGTCGGTGGC GGCGGTGGCA CTCGGCGCGA CCGTGGTGGA AAAACACTTC
ACCCTCGACC GTTCAGCCGG AGGGGTGGAC GCCAGTTTCT CGCTGGAGCC GGCGGAACTG
GCCAGCCTGG TGGTCGAGAC CGAACGTGCC TGGCAGGCCA TGGGCCAGGT GCATTACGGG
GTGACCGAGG CTGAGCAGAA GTCGCTGGTT TACCGTCGGT CGCTGTACGT CACGACCGAT
ATGGCGGCCG GCGAACCCTT CACGGCGGCC AACCTGCGCG CCATTCGTCC CGGTCTCGGT
CTGCCGCCCA AGCACACCGA TGCGGTCCTC GGGCGCCGTG CGCGCCAGCC GATCAAGCGT
GGTACACCGC TGGACTGGTC ATTGGTCGAA TGA
 
Protein sequence
MSSFKIGNRQ IGADAPPFII AEMSGNHNQS LDVALQIVEA AAKAGAHALK LQTYTAETMT 
LDLAQGEFFI KDPNSLWAGT SLYDLYEKAH TPWEWHAPIF ARARELGMLA FSTPFDDSAV
DFLESLDVPA YKIASFENTD LPLIRRVAAT GKPLIISTGM ASIAELDETV RAAREAGCKD
LVLLKCTSTY PATPLNSHVR TIPHLRELFG CEVGLSDHSM GVGVSVAAVA LGATVVEKHF
TLDRSAGGVD ASFSLEPAEL ASLVVETERA WQAMGQVHYG VTEAEQKSLV YRRSLYVTTD
MAAGEPFTAA NLRAIRPGLG LPPKHTDAVL GRRARQPIKR GTPLDWSLVE