Gene Pfl01_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1519 
Symbol 
ID3717022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1707803 
End bp1708960 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content63% 
IMG OID 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_347251 
Protein GI77457746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.726824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCT ACGGCCGGCA AAGCCTCGAC CAGACGGACA TCGACGCGGT GGTCGAGGTG 
TTGCAGTCCG ACTGGTTGAC CCAGGGTCCG ACCATCGAAC GCTTCGAGCA GGCGATGGCC
GAGCGTTGTC AGGCCGATTT CGCCGTGGCA GTGTGCAACG CCACGGCGGC GCTGCACATT
GCCTGTCTCG CGGCGGGGCT GGGAACGGGC GACCGCTTGT GGACCACGCC GAACACCTTT
CTCGCGTCGG CCAACTGCGG CCGTTATTGC GGTGCCGACG TTGATTTCGT GGACATCGAT
CCGCTGACCT GGAACCTCGA TGCCGAAGTT CTGGCAAGCA AACTCGATGC TGCCGAACGC
GATGGTACGC TGCCCAAAGT GCTGGTGGCA GTGGCGTTCT CCGGGCAGAG CTGCGACATG
CGGCGGATTG CCGAACTGGC CGAGCGCTAT AACTTCACGG TCATCGAAGA CGCCTCCCAC
GCGGTCGGCG CCAGTTACGC CGGGCGCCCG GTGGGTTGCG GTGAATTTGC CGCGATGACC
GTGTTCAGCT TTCATCCGGT GAAGATCATC ACCAGCGCTG AAGGCGGCAT GGTGCTGACC
AATCGCCCGG AACTGGCCGA GCGCCTGCAA CGCCTGCGCA GCCACGGCAT GACCCGCGAT
CCGCAGCAGA TGACCGAACC CAGCCACGGC CCGTGGTACT ACCAGCAGGT CGAACTGGGT
TTCAATTACC GGATCACCGA TCTGCAAGCC GCGCTGGGCC TGTCACAGTT GGGCAAACTG
GACGAGTTCA TCGCCCGTCG CCGGGAGCTG GCCGCGCGTT ACGACCGCTT GCTGGCGTAC
TTGCCGGTGA CTGTGCCGAG CCTCCAGCCG GACGCCGAAT CGGCCTGGCA TCTTTATGTG
GTGCGTTTGC AGACCGAACG CATCAGCCTC AGCCACCGTC AGGTGTTCGA AGGCTTGCGC
GCCGCCGGCG TCGGCGTGAA CCTGCACTAC ATTCCGGTGC ATTTGCAGCC GTACTATCGT
GACCTGGGTT TCTCCGAGGG TGACTTCCCC GAAGCGGAGC GTTATTACGC CGAAGCGATC
AGCCTGCCGC TGTTTCCGTT GCTGAGCGAT CAGCAGCAGG ATTATGTGGT TGAGCAATTG
CGTCGGTTGA CTGAATGA
 
Protein sequence
MIPYGRQSLD QTDIDAVVEV LQSDWLTQGP TIERFEQAMA ERCQADFAVA VCNATAALHI 
ACLAAGLGTG DRLWTTPNTF LASANCGRYC GADVDFVDID PLTWNLDAEV LASKLDAAER
DGTLPKVLVA VAFSGQSCDM RRIAELAERY NFTVIEDASH AVGASYAGRP VGCGEFAAMT
VFSFHPVKII TSAEGGMVLT NRPELAERLQ RLRSHGMTRD PQQMTEPSHG PWYYQQVELG
FNYRITDLQA ALGLSQLGKL DEFIARRREL AARYDRLLAY LPVTVPSLQP DAESAWHLYV
VRLQTERISL SHRQVFEGLR AAGVGVNLHY IPVHLQPYYR DLGFSEGDFP EAERYYAEAI
SLPLFPLLSD QQQDYVVEQL RRLTE