Gene Pfl01_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1495 
Symbol 
ID3717095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1673803 
End bp1675002 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content65% 
IMG OID 
Productmajor facilitator superfamily transporter 
Protein accessionYP_347227 
Protein GI77457722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.490608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCT CTATGCCCGA ACCCCAGCGC CCCCTGGCGG TCACGCTGCA AGTCGTTTCC 
ATCGTCCTGT TCACCTTCAT CGGCTACCTG AACATCGGCA TTCCATTGGC GGTGCTGCCC
GGCTATGTGC ACAGCGACCT GGGCTTCGGT GCGGTCATCG CCGGGCTGGT GATCAGCGTG
CAATACCTCG CCACCCTGCT CAGCCGCCCG TATGCTGGCA AGATCATCGA CAACCAGGGC
AGCAAACGTG CGGTGATGAT CGGTCTGGCC GGTTGTGGTT TGAGCGGTGT GTTCATGCTG
ATTTCGGCGT GGACGCCCAA CCTGCCGCTG CTGAGCCTGA TCAGCCTGTT CGTCGGCCGC
CTGGTGCTGG GCAGCGCGGA AAGTCTGGTC GGCTCAGGCT CGATCGGCTG GGGCATCGGC
CGCGTCGGCG CCGCCAACAC CGCCAAAGTC ATCTCGTGGA ACGGCATCGC CAGTTACGGT
GCGCTGGCGG TCGGTGCGCC GCTCGGGGTA TGGCTGGTCA GCCGTTTCGG TTTGTGGAGC
ATGGGTGTGA GCATTCTGCT GCTCGCCACG CTGGGGCTGC TGCTGGCCTG GCCGAAAACC
GCCGCGCCGA TCGTGGCCGG CGAGCGTCTG CCGTTCATGC ATGTGCTGGG CCGCGTCTTC
CCGCACGGCT GCGGACTGGC GTTGGGCTCG ATCGGTTTCG GCACCATCGC CACCTTCATC
ACCCTGTATT ACGCCACGCA GCACTGGGAC AACGCGGTGC TGTGCCTGAG CCTGTTCGGC
GCCAGCTTCA TCGGTGCGCG ACTGCTGTTC GGCAACCTGA TCAATCGCCT CGGCGGCTTT
CGTGTGGCGA TTGCCTGCCT GTCGGTGGAA ACGTTGGGCC TGCTGTTGCT GTGGCTGGCG
CCGGACGCGC ACTGGGCACT GGCCGGCGCG GCATTGAGCG GTTTCGGTTT CTCGCTGGTA
TTCCCGGCGC TCGGCGTGGA GGCGGTAAAC CTGGTGCCGG CCTCCAGCCG TGGTGCGGCG
GTCGGGGCTT ATTCGTTGTT CATCGACTTG TCGCTGGGCA TCACCGGCCC TTTGGCGGGC
GCCATTGCAG CGGGCTTCGG ATTTGCCTCG ATTTTCCTGT TCGCCGCCCT CGCCGCGCTG
AGCGGTCTGG CATTGAGCGT CTATCTCTAC CGCCACACGG CGAAGTACCG CGAAGACTAG
 
Protein sequence
MSSSMPEPQR PLAVTLQVVS IVLFTFIGYL NIGIPLAVLP GYVHSDLGFG AVIAGLVISV 
QYLATLLSRP YAGKIIDNQG SKRAVMIGLA GCGLSGVFML ISAWTPNLPL LSLISLFVGR
LVLGSAESLV GSGSIGWGIG RVGAANTAKV ISWNGIASYG ALAVGAPLGV WLVSRFGLWS
MGVSILLLAT LGLLLAWPKT AAPIVAGERL PFMHVLGRVF PHGCGLALGS IGFGTIATFI
TLYYATQHWD NAVLCLSLFG ASFIGARLLF GNLINRLGGF RVAIACLSVE TLGLLLLWLA
PDAHWALAGA ALSGFGFSLV FPALGVEAVN LVPASSRGAA VGAYSLFIDL SLGITGPLAG
AIAAGFGFAS IFLFAALAAL SGLALSVYLY RHTAKYRED