Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1495 |
Symbol | |
ID | 3717095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1673803 |
End bp | 1675002 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | major facilitator superfamily transporter |
Protein accession | YP_347227 |
Protein GI | 77457722 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.490608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCT CTATGCCCGA ACCCCAGCGC CCCCTGGCGG TCACGCTGCA AGTCGTTTCC ATCGTCCTGT TCACCTTCAT CGGCTACCTG AACATCGGCA TTCCATTGGC GGTGCTGCCC GGCTATGTGC ACAGCGACCT GGGCTTCGGT GCGGTCATCG CCGGGCTGGT GATCAGCGTG CAATACCTCG CCACCCTGCT CAGCCGCCCG TATGCTGGCA AGATCATCGA CAACCAGGGC AGCAAACGTG CGGTGATGAT CGGTCTGGCC GGTTGTGGTT TGAGCGGTGT GTTCATGCTG ATTTCGGCGT GGACGCCCAA CCTGCCGCTG CTGAGCCTGA TCAGCCTGTT CGTCGGCCGC CTGGTGCTGG GCAGCGCGGA AAGTCTGGTC GGCTCAGGCT CGATCGGCTG GGGCATCGGC CGCGTCGGCG CCGCCAACAC CGCCAAAGTC ATCTCGTGGA ACGGCATCGC CAGTTACGGT GCGCTGGCGG TCGGTGCGCC GCTCGGGGTA TGGCTGGTCA GCCGTTTCGG TTTGTGGAGC ATGGGTGTGA GCATTCTGCT GCTCGCCACG CTGGGGCTGC TGCTGGCCTG GCCGAAAACC GCCGCGCCGA TCGTGGCCGG CGAGCGTCTG CCGTTCATGC ATGTGCTGGG CCGCGTCTTC CCGCACGGCT GCGGACTGGC GTTGGGCTCG ATCGGTTTCG GCACCATCGC CACCTTCATC ACCCTGTATT ACGCCACGCA GCACTGGGAC AACGCGGTGC TGTGCCTGAG CCTGTTCGGC GCCAGCTTCA TCGGTGCGCG ACTGCTGTTC GGCAACCTGA TCAATCGCCT CGGCGGCTTT CGTGTGGCGA TTGCCTGCCT GTCGGTGGAA ACGTTGGGCC TGCTGTTGCT GTGGCTGGCG CCGGACGCGC ACTGGGCACT GGCCGGCGCG GCATTGAGCG GTTTCGGTTT CTCGCTGGTA TTCCCGGCGC TCGGCGTGGA GGCGGTAAAC CTGGTGCCGG CCTCCAGCCG TGGTGCGGCG GTCGGGGCTT ATTCGTTGTT CATCGACTTG TCGCTGGGCA TCACCGGCCC TTTGGCGGGC GCCATTGCAG CGGGCTTCGG ATTTGCCTCG ATTTTCCTGT TCGCCGCCCT CGCCGCGCTG AGCGGTCTGG CATTGAGCGT CTATCTCTAC CGCCACACGG CGAAGTACCG CGAAGACTAG
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Protein sequence | MSSSMPEPQR PLAVTLQVVS IVLFTFIGYL NIGIPLAVLP GYVHSDLGFG AVIAGLVISV QYLATLLSRP YAGKIIDNQG SKRAVMIGLA GCGLSGVFML ISAWTPNLPL LSLISLFVGR LVLGSAESLV GSGSIGWGIG RVGAANTAKV ISWNGIASYG ALAVGAPLGV WLVSRFGLWS MGVSILLLAT LGLLLAWPKT AAPIVAGERL PFMHVLGRVF PHGCGLALGS IGFGTIATFI TLYYATQHWD NAVLCLSLFG ASFIGARLLF GNLINRLGGF RVAIACLSVE TLGLLLLWLA PDAHWALAGA ALSGFGFSLV FPALGVEAVN LVPASSRGAA VGAYSLFIDL SLGITGPLAG AIAAGFGFAS IFLFAALAAL SGLALSVYLY RHTAKYRED
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