Gene Pfl01_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1489 
Symbol 
ID3717128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1667633 
End bp1668451 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID 
Productcondensin subunit ScpA 
Protein accessionYP_347221 
Protein GI77457716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.310818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG TGGAAACCGT TGATCCCCAG GCCGGTGCCC AGCAGGAACT GCCGTTTGCC 
ATGGTCTATG GCCAGGCCGT CACGGAAATG CCGCTGGACC TGTACATCCC GCCGGACGCC
CTGGAAGTCT TCCTCGAAGC CTTCGAAGGC CCCCTCGACC TGCTGCTGTA CCTGATCCGC
AAACAGAACA TCAACATCCT CGACATCCCG GTGGCGGAAA TCACCCGCCA GTACATGGGT
TATGTCGAGC TGATGCAGTC GGTGCGCCTG GAACTGGCCG CCGAGTATCT GGTGATGGCC
GCGATGCTGG CCGAGATCAA GTCGCGGATG CTGCTGCCCC GGGCCGAAAC CGTCGAGGAC
GAAGAGGACG ACCCGCGCGC CGAACTGATC CGCCGTCTGC AGGAGTACGA ACGGTTCAAG
GCCGCTGCCG AGGGCATCGA TGGCCTGAGT CGGGTCGGCC GCGATGTGAT CGTGCCCAAG
CTCGACGCCC CGGAAGCCCG CGCGCGCAAG CTGTTGCCGG ACGTGGCGCT GGAAGAAATC
CTGATGTCCA TGGCCGAAGT GCTACGCCGC GGCGACATGT TCGAAAGCCA TCAGGTCAGC
CGCGAGGCGC TGTCCACCCG CGAGCGCATG AGCGACGTGC TGGAGCGGCT CAAGGGCGGC
GGGTTTGTGC CGTTCATCGA GCTGTTCACC GCCGAAGAGG GCAAGCTCGG CGTGGTGGTG
ACCTTCATGG CCATCCTTGA ACTGGTCAAG GAATCCCTGA TCGAGCTGGT GCAGAATGAG
CCGTTCGCCG CGATCCACGT GCGAGCCCGA GCCGAATAA
 
Protein sequence
MSAVETVDPQ AGAQQELPFA MVYGQAVTEM PLDLYIPPDA LEVFLEAFEG PLDLLLYLIR 
KQNINILDIP VAEITRQYMG YVELMQSVRL ELAAEYLVMA AMLAEIKSRM LLPRAETVED
EEDDPRAELI RRLQEYERFK AAAEGIDGLS RVGRDVIVPK LDAPEARARK LLPDVALEEI
LMSMAEVLRR GDMFESHQVS REALSTRERM SDVLERLKGG GFVPFIELFT AEEGKLGVVV
TFMAILELVK ESLIELVQNE PFAAIHVRAR AE