Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1489 |
Symbol | |
ID | 3717128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1667633 |
End bp | 1668451 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | condensin subunit ScpA |
Protein accession | YP_347221 |
Protein GI | 77457716 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.310818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCAG TGGAAACCGT TGATCCCCAG GCCGGTGCCC AGCAGGAACT GCCGTTTGCC ATGGTCTATG GCCAGGCCGT CACGGAAATG CCGCTGGACC TGTACATCCC GCCGGACGCC CTGGAAGTCT TCCTCGAAGC CTTCGAAGGC CCCCTCGACC TGCTGCTGTA CCTGATCCGC AAACAGAACA TCAACATCCT CGACATCCCG GTGGCGGAAA TCACCCGCCA GTACATGGGT TATGTCGAGC TGATGCAGTC GGTGCGCCTG GAACTGGCCG CCGAGTATCT GGTGATGGCC GCGATGCTGG CCGAGATCAA GTCGCGGATG CTGCTGCCCC GGGCCGAAAC CGTCGAGGAC GAAGAGGACG ACCCGCGCGC CGAACTGATC CGCCGTCTGC AGGAGTACGA ACGGTTCAAG GCCGCTGCCG AGGGCATCGA TGGCCTGAGT CGGGTCGGCC GCGATGTGAT CGTGCCCAAG CTCGACGCCC CGGAAGCCCG CGCGCGCAAG CTGTTGCCGG ACGTGGCGCT GGAAGAAATC CTGATGTCCA TGGCCGAAGT GCTACGCCGC GGCGACATGT TCGAAAGCCA TCAGGTCAGC CGCGAGGCGC TGTCCACCCG CGAGCGCATG AGCGACGTGC TGGAGCGGCT CAAGGGCGGC GGGTTTGTGC CGTTCATCGA GCTGTTCACC GCCGAAGAGG GCAAGCTCGG CGTGGTGGTG ACCTTCATGG CCATCCTTGA ACTGGTCAAG GAATCCCTGA TCGAGCTGGT GCAGAATGAG CCGTTCGCCG CGATCCACGT GCGAGCCCGA GCCGAATAA
|
Protein sequence | MSAVETVDPQ AGAQQELPFA MVYGQAVTEM PLDLYIPPDA LEVFLEAFEG PLDLLLYLIR KQNINILDIP VAEITRQYMG YVELMQSVRL ELAAEYLVMA AMLAEIKSRM LLPRAETVED EEDDPRAELI RRLQEYERFK AAAEGIDGLS RVGRDVIVPK LDAPEARARK LLPDVALEEI LMSMAEVLRR GDMFESHQVS REALSTRERM SDVLERLKGG GFVPFIELFT AEEGKLGVVV TFMAILELVK ESLIELVQNE PFAAIHVRAR AE
|
| |