Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1481 |
Symbol | |
ID | 3717120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1661927 |
End bp | 1663267 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_347213 |
Protein GI | 77457708 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0335199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0698163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTTCAT TGTTCTGGCG TATCCTCGCC AGCTTCTGGC TGGCCATCGC TCTGGTTGCA GGGCTTTCCA TTCTGCTAGG GCACATGCTC AACCAGGACG CGTGGATCCT CAGCCGCCAT CCGGGCCTCA ACACTCTGGC CGCGGAATGG ACGCAGACTT ACGAAGCCCA GGGCGAAAAC GCCGCCCAGG ACATCCTCGA ACAGCGCAAG CGCCAGTACC ACATCGACGT GCAAGTGCTG AACGAAAGCG GCGACCCGGT GGTGCGCGGC ACCTTCCCCC GGCGCGCGGC CGCCTTCGAG GCGCGGCAGA ACAACGATGA CCGACGCCTG CCATGGCGCC GTCTGACCGA CGAATTCACC AGCGACAAAA GCGGCGACAC CTACCTCTTC ATCTATCGCA TCCCGCACCC GGAACTCGAC GCCTGGCACC GCGAAAGCCT GCTCTGGCCG TTGAGTGCAC TGGGCATCGC GCTGGTGGTG CTGACTCTGT TCAGCCTGCT GGTGACGTTT TCCATCACCC GGCCCCTCAG TCGCCTGCGC GGCGCGGTGC ATGACCTCGG CCAGACCACG TATCAGCAGA ACAGCCTGGC GCAACTGGCC AACCGCCGCG ATGAATTCGG TGTGCTGGCC AACGACTTCA ACCGAATGGG CGCCCGTCTG CAAAGCCTGA TCGGCAGTCA GCGCCAGTTG CTGCGCGATG TGTCCCACGA ACTGCGTTCA CCGCTGGCAC GGCTGCGCAT TGCCCTAGCT CTGGCCGAGC GTGCAAGCCC GGAAGAACGG GAAAAACTCT GGCCGCGCCT GACCCGCGAG TGTGATCGGC TGGAAGCGTT GATCAGTGAA ATTCTGGTGC TGGCACGGGT CGATGCCGAC AACGCCAGCG CCGAAGACGT GGATCTGAAT GCCTTGCTCG CCACCCTGCA AAAGGATGCG CAGCTGGGCT CGCCGGAGCA GACCGTGCGT CTGGAGGCCG AACCGGCACT CAATCTGACA GGCTGGCCGA CCATGATCGA ACGCGCCGTG GACAACCTGC TGCGCAATGC CCAGCGCTTC AACCCGGTGG GGCAGTCGAT TGAAATGCAG GCGTCACGTC AGGGCGAGCG GATCGTGGTC AGCGTGCGTG ACCATGGGCC AGGGGTGCAG GCCGAACATC TGAGCCAGTT GGGCGAACCG TTTTATCGGG CGCCGGGGCA GACCGCTGCC GGCCATGGCC TGGGACTGGC GATTGCCCGG CGGGCGGCGG AACGGCATGG CGGGACGCTG GTGCTGGCCA ATCATCCGCA GGGCGGGTTT GTGGCGAGTC TTGAATTGCC TCTCGTACCG GGGGCAGTTG TCCAACCATA A
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Protein sequence | MRSLFWRILA SFWLAIALVA GLSILLGHML NQDAWILSRH PGLNTLAAEW TQTYEAQGEN AAQDILEQRK RQYHIDVQVL NESGDPVVRG TFPRRAAAFE ARQNNDDRRL PWRRLTDEFT SDKSGDTYLF IYRIPHPELD AWHRESLLWP LSALGIALVV LTLFSLLVTF SITRPLSRLR GAVHDLGQTT YQQNSLAQLA NRRDEFGVLA NDFNRMGARL QSLIGSQRQL LRDVSHELRS PLARLRIALA LAERASPEER EKLWPRLTRE CDRLEALISE ILVLARVDAD NASAEDVDLN ALLATLQKDA QLGSPEQTVR LEAEPALNLT GWPTMIERAV DNLLRNAQRF NPVGQSIEMQ ASRQGERIVV SVRDHGPGVQ AEHLSQLGEP FYRAPGQTAA GHGLGLAIAR RAAERHGGTL VLANHPQGGF VASLELPLVP GAVVQP
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