Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1480 |
Symbol | |
ID | 3717119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1661350 |
End bp | 1661916 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | nitroreductase |
Protein accession | YP_347212 |
Protein GI | 77457707 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0228393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.126132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGCTC TCGACGCTTT GCTCAACCGT GTTTCCGTTC CACGACTGAT CGATCCGGCC CCCACCGCCG AACAGCGCGA AGTGCTGTTC GCCGCCGCGA CCCGCGCACC GGATCACGGC CATTTGCAGC CGTATCGCTT CCTGACCGTC GAAGGCGCGG CGCGTGAGCA GATGGGCGAG TTGCTGGCCG AAGCTGCAAA AATGCAGGAA GGCGAAGTCA CCGAAGCGAT GATCGACAAG GCCCGCAACG GCCCGCTGCG GGCGCCGCTG GTGGTCGTGG TCATCGCCAA GTTGCAGGAT CACGTCAAAT ACCCGAAGGC CGAGCAGTTG CTGGCCGCAG GCTGTGCGGC TCACGGGATT CTGCTGGCGG CTTACGCGCA GGGGATTGGT GCGGTGTGGC GTACGGGTGA TCTGGCGTAC TCGAAACATG TCGCCAAGGG TTTGGGCCTG ACGGATGACG AAGAGGTGAT TGCCTTCCTG TACCTCGGCA CACCGCAGAA AGAACCGCGG GTGGCCGAGA AGGTTGATCT GGCGGAGTTT GTCAGCGCGT GGCCAGCAAA GGCCTGA
|
Protein sequence | MQALDALLNR VSVPRLIDPA PTAEQREVLF AAATRAPDHG HLQPYRFLTV EGAAREQMGE LLAEAAKMQE GEVTEAMIDK ARNGPLRAPL VVVVIAKLQD HVKYPKAEQL LAAGCAAHGI LLAAYAQGIG AVWRTGDLAY SKHVAKGLGL TDDEEVIAFL YLGTPQKEPR VAEKVDLAEF VSAWPAKA
|
| |