Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1478 |
Symbol | |
ID | 3717117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1658756 |
End bp | 1659817 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_347210 |
Protein GI | 77457705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.010592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.128482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC GAACGACTTC TGCAAGCTGG GCGATGGGGA TTGTCAAAGC ACTGGAAATG GACGGCCTGG ATTGCCGGGT CTTGTTCAGA CAGCTGGGGC TCGACTACGC GGCGCTGGAG GATCCGGACG CACGCTTCCC ACAGGATTCC ATGACCCGAC TGTGGCAACG GGCGGTCGAG CTGTCCGGTA ATCCCGCCAT CGGCCTGAAC ATGGGCAAGG TGGTGCGGCC GGCTTCGTTC CATGTCGCGG GCTATGCGCT GATGTCCAGC AATACGCTGG CGGAAGGTTT TCAGCGACTG GTGCGTTATC AGCGGATCAT CGCCGAAAGT GCCGACCTGA GTTTTCGCCT GCTCGATGAA GGTTATGCGC TGATCCTGAC GGTGCATGGC GATCATCTGC CGCCGACCCG GCAAAGTGCC GAAGCCTCGC TGGCCTGCGC ACTCGCGCTG TGCGGCTGGC TGACCGGGCG CACGCTGCAC CCGCGCAAAG TGCTGGTGCA GGGCGATGAG CCGGATGATC TTGAACCCTA CAAACAAGCC TTCCATGCAC CGCTGGTGTT CAACGCGCCG TATGACGCGC TGATCTTCGA ACGCGCCGAC ATGGAAGCGC CGCTGCCCAC CGCCAACGAA GCGATGGCGC TGCTGCACGA CCGGTTTGCC GGGGAATATC TGGCGCGGTT TTCCGAGAGT CGCGTGACCC ACAAGGCACG TCAGGTGCTG TGCCGCCTGC TGCCGCAGGG CGAACCCAAG CGCGACACGG TGGCGCAGAC CTTGCACCTG TCGCAGCGCA CCTTGCAACG TCGTTTGCAG GAGGAGGGCA CCAGTTTTCA GCAGTTGCTC GACGACACGC GCCGCGAACT CGCCGAGCAA TACCTGGCGC AGCCGAGCAT GACCTTGCTG GAGATTGCCT ATCTGCTGGG CTTTGCCGAC CCGAGCAATT TCTTCCGCGC CTTCCGCCGC TGGTTCGACA CCACGCCCGG CGATTATCGG GCGCGGTTGC TGGAAGCGCC GAAGGCGATC AGTGACGCCA GAACGCCGGA ATACACAGTA CAAACACCGT AA
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Protein sequence | MSERTTSASW AMGIVKALEM DGLDCRVLFR QLGLDYAALE DPDARFPQDS MTRLWQRAVE LSGNPAIGLN MGKVVRPASF HVAGYALMSS NTLAEGFQRL VRYQRIIAES ADLSFRLLDE GYALILTVHG DHLPPTRQSA EASLACALAL CGWLTGRTLH PRKVLVQGDE PDDLEPYKQA FHAPLVFNAP YDALIFERAD MEAPLPTANE AMALLHDRFA GEYLARFSES RVTHKARQVL CRLLPQGEPK RDTVAQTLHL SQRTLQRRLQ EEGTSFQQLL DDTRRELAEQ YLAQPSMTLL EIAYLLGFAD PSNFFRAFRR WFDTTPGDYR ARLLEAPKAI SDARTPEYTV QTP
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