Gene Pfl01_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1478 
Symbol 
ID3717117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1658756 
End bp1659817 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_347210 
Protein GI77457705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.010592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.128482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC GAACGACTTC TGCAAGCTGG GCGATGGGGA TTGTCAAAGC ACTGGAAATG 
GACGGCCTGG ATTGCCGGGT CTTGTTCAGA CAGCTGGGGC TCGACTACGC GGCGCTGGAG
GATCCGGACG CACGCTTCCC ACAGGATTCC ATGACCCGAC TGTGGCAACG GGCGGTCGAG
CTGTCCGGTA ATCCCGCCAT CGGCCTGAAC ATGGGCAAGG TGGTGCGGCC GGCTTCGTTC
CATGTCGCGG GCTATGCGCT GATGTCCAGC AATACGCTGG CGGAAGGTTT TCAGCGACTG
GTGCGTTATC AGCGGATCAT CGCCGAAAGT GCCGACCTGA GTTTTCGCCT GCTCGATGAA
GGTTATGCGC TGATCCTGAC GGTGCATGGC GATCATCTGC CGCCGACCCG GCAAAGTGCC
GAAGCCTCGC TGGCCTGCGC ACTCGCGCTG TGCGGCTGGC TGACCGGGCG CACGCTGCAC
CCGCGCAAAG TGCTGGTGCA GGGCGATGAG CCGGATGATC TTGAACCCTA CAAACAAGCC
TTCCATGCAC CGCTGGTGTT CAACGCGCCG TATGACGCGC TGATCTTCGA ACGCGCCGAC
ATGGAAGCGC CGCTGCCCAC CGCCAACGAA GCGATGGCGC TGCTGCACGA CCGGTTTGCC
GGGGAATATC TGGCGCGGTT TTCCGAGAGT CGCGTGACCC ACAAGGCACG TCAGGTGCTG
TGCCGCCTGC TGCCGCAGGG CGAACCCAAG CGCGACACGG TGGCGCAGAC CTTGCACCTG
TCGCAGCGCA CCTTGCAACG TCGTTTGCAG GAGGAGGGCA CCAGTTTTCA GCAGTTGCTC
GACGACACGC GCCGCGAACT CGCCGAGCAA TACCTGGCGC AGCCGAGCAT GACCTTGCTG
GAGATTGCCT ATCTGCTGGG CTTTGCCGAC CCGAGCAATT TCTTCCGCGC CTTCCGCCGC
TGGTTCGACA CCACGCCCGG CGATTATCGG GCGCGGTTGC TGGAAGCGCC GAAGGCGATC
AGTGACGCCA GAACGCCGGA ATACACAGTA CAAACACCGT AA
 
Protein sequence
MSERTTSASW AMGIVKALEM DGLDCRVLFR QLGLDYAALE DPDARFPQDS MTRLWQRAVE 
LSGNPAIGLN MGKVVRPASF HVAGYALMSS NTLAEGFQRL VRYQRIIAES ADLSFRLLDE
GYALILTVHG DHLPPTRQSA EASLACALAL CGWLTGRTLH PRKVLVQGDE PDDLEPYKQA
FHAPLVFNAP YDALIFERAD MEAPLPTANE AMALLHDRFA GEYLARFSES RVTHKARQVL
CRLLPQGEPK RDTVAQTLHL SQRTLQRRLQ EEGTSFQQLL DDTRRELAEQ YLAQPSMTLL
EIAYLLGFAD PSNFFRAFRR WFDTTPGDYR ARLLEAPKAI SDARTPEYTV QTP