Gene Pfl01_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1474 
Symbol 
ID3717113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1655934 
End bp1656698 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_347206 
Protein GI77457701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.705391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.109317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGA TCCTGACCCT GCGCCATTAC AGCCACGACC TGATCGCCCA CAGCCACGAC 
CACGCGCAAC TGGTGTTCGG CCTGTCAGGC GCGCTGGATT TCGAAGTCGA AGGGCGTGGC
AGTCAGGTAT TGCAGCAGAG CTTCGTGGTG ATCCCCGCCG GCGCGCATCA CGCGTGCGGC
AGCCCCAAGG GCAGCCGCTG TCTGGTGCTG GATGTGCCGG ACGAACAATG GCTGGAGCGC
TCGCTGGGCA ATCACGCCGA TGCCAGCCGC CGCCTGCTGG ACAACGCCGC CCGATTGTCG
CTGGATGCCG GGCAAGGTCA ACTGGTCAAC TGGCTGGCGA ACAGTCCGGT GGACGACCCG
TTGATTGCGC AACAAGGCGC GGTGTTGCTG CTGGCGAGCC TGAACCACGT GCCACCCGTC
GAGATCGTCG CGCGCCGCCT GCCCTACGCG GCACTCGATG CGCACATCGA GCAGTACGCG
GCCTATCCGC TGCAAGTCGC GGATCTGGCG CGCGTCGCCG GATTATCCAG CGCCCGGCTG
CATGCGCGGT TCGTCGCTGA ATGCGGGCAG ACACCGATGG ACTACATTCG CAGTCGCCGG
CTGCATAAAG CCGTGGCGCT GTTGCGCAAC ACCACGCTGC CCATCGGTGA AGTGGCCAGC
CGTGTCGGCT ACAACTCGCA AAGCGCATTT TCGGCCGCCG TCCTGCGTGA GTTCGGCACC
TCTCCTACAC AATTGCGACG CGAGGCTGAC GACAAAAGTC GATAG
 
Protein sequence
MHPILTLRHY SHDLIAHSHD HAQLVFGLSG ALDFEVEGRG SQVLQQSFVV IPAGAHHACG 
SPKGSRCLVL DVPDEQWLER SLGNHADASR RLLDNAARLS LDAGQGQLVN WLANSPVDDP
LIAQQGAVLL LASLNHVPPV EIVARRLPYA ALDAHIEQYA AYPLQVADLA RVAGLSSARL
HARFVAECGQ TPMDYIRSRR LHKAVALLRN TTLPIGEVAS RVGYNSQSAF SAAVLREFGT
SPTQLRREAD DKSR