Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1474 |
Symbol | |
ID | 3717113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1655934 |
End bp | 1656698 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_347206 |
Protein GI | 77457701 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.705391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.109317 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCCGA TCCTGACCCT GCGCCATTAC AGCCACGACC TGATCGCCCA CAGCCACGAC CACGCGCAAC TGGTGTTCGG CCTGTCAGGC GCGCTGGATT TCGAAGTCGA AGGGCGTGGC AGTCAGGTAT TGCAGCAGAG CTTCGTGGTG ATCCCCGCCG GCGCGCATCA CGCGTGCGGC AGCCCCAAGG GCAGCCGCTG TCTGGTGCTG GATGTGCCGG ACGAACAATG GCTGGAGCGC TCGCTGGGCA ATCACGCCGA TGCCAGCCGC CGCCTGCTGG ACAACGCCGC CCGATTGTCG CTGGATGCCG GGCAAGGTCA ACTGGTCAAC TGGCTGGCGA ACAGTCCGGT GGACGACCCG TTGATTGCGC AACAAGGCGC GGTGTTGCTG CTGGCGAGCC TGAACCACGT GCCACCCGTC GAGATCGTCG CGCGCCGCCT GCCCTACGCG GCACTCGATG CGCACATCGA GCAGTACGCG GCCTATCCGC TGCAAGTCGC GGATCTGGCG CGCGTCGCCG GATTATCCAG CGCCCGGCTG CATGCGCGGT TCGTCGCTGA ATGCGGGCAG ACACCGATGG ACTACATTCG CAGTCGCCGG CTGCATAAAG CCGTGGCGCT GTTGCGCAAC ACCACGCTGC CCATCGGTGA AGTGGCCAGC CGTGTCGGCT ACAACTCGCA AAGCGCATTT TCGGCCGCCG TCCTGCGTGA GTTCGGCACC TCTCCTACAC AATTGCGACG CGAGGCTGAC GACAAAAGTC GATAG
|
Protein sequence | MHPILTLRHY SHDLIAHSHD HAQLVFGLSG ALDFEVEGRG SQVLQQSFVV IPAGAHHACG SPKGSRCLVL DVPDEQWLER SLGNHADASR RLLDNAARLS LDAGQGQLVN WLANSPVDDP LIAQQGAVLL LASLNHVPPV EIVARRLPYA ALDAHIEQYA AYPLQVADLA RVAGLSSARL HARFVAECGQ TPMDYIRSRR LHKAVALLRN TTLPIGEVAS RVGYNSQSAF SAAVLREFGT SPTQLRREAD DKSR
|
| |