| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1460 |
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| Symbol | |
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| ID | 3717138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1631231 |
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| End bp | 1632592 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_347192 |
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| Protein GI | 77457687 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTT CCTCCTCTTC AAAACCGCGC GGTTACTTCG ACAGTTTCGG CAAAAGCGCC
GAGGCTGAAT TCATGCCGGA AACCGCCGGT GCCTCGCTGC AGGATTCGCC ACGCTGGTCG
CGCATCACCG TGTGGCTGGC GGCGGCGCTG CTGATCAGTG CGCTGGTCTG GGCCAAGTTC
GCGGTGCTGC AGGAAGTGAC CATGGGCGAA GGCAAGGCGA TTCCGTCGAG CAAGGTTCAG
GTGATCCAGA ACCTCGAGGG CGGGATCGTC ACCGAGATCT TCGTGCGCGA AGGGCAGATG
GTCGACAAGG GCGACAAACT GCTGCGCCTG GACGACACGC GGTTTCTGTC GAACAAGGGT
GAGAGCGAGG CTGATCGTTA TGCCTTGACC GCGCAGGTCG AACGCTTGTC CGCCGAAGCC
GAAGGCCGGC CATTCAAGCT CTCGGACGAA GTGATCGCCA AGGCCCCGCA AGTGGCCGAG
GACGAGCGTT CGCTGTACGA ACAACGGCAG CGGCGGCTGG CCAGCGAGCA ACGCACCCTC
AGCGAACAGC TGCGGCAGAA GACTCAGGAG CTGGCGGAGT TTCGCTCGAA ACAGGGTCAG
TACAGCTCAA GCCTGGCGTT GGTGAATCAG GAAATGAACA TGTCCGAACC GCTGGTCAAG
ACTGGCGCCG TGTCGCCGGT GGAGATCCTG CGGCTCAAGC GCAGTGCCGT GGAAATCCGC
GGTTCCCTGA ACGCCACGAC CCTGGCCATT CCCCGCGCCG AATCGGCCAT CGCCGAGATC
CGCAGCAAGA TCGACGAATC GGAACAGACT TTCCGCTCGG AAGCGGCCAA GGAGCTCAAT
GAGAAACGTA CCGACCTGTC GAAAATCACT GCTTCGAGCA TCGCCATCGA CGACCGCGTC
AGCCGTACCA CGGTGACCTC GCCGGTGCAT GGGGTGATCA AGCAAATGAA GGTCAACACC
ATCGGCGGCG TGGTGCAGCC GGGCAGCGAC ATGGTGGAAA TCGTGCCGCT GGAAGACAAC
CTGCTGATCG AAGCCAAAGT CCGGCCGCAG GACGTGGCGT TCCTGCACCC GGGCCAGAAA
GCCATGGTCA AGTTCAGCGC CTACGACTAC ACGATCTACG GCGGGCTCAG TGCCAAACTT
GAGCTGATCG GCGCTGACAC CATCACCGAC GACAAGGGCA ACAGCTTCTA CCTGATCCAG
GTGCGCACCG ACAAAAACCA CTTGGGCGGG GATGTGAAAC CGCTGCTGAT CATTCCGGGG
ATGGTGGCGA CGGTGGACAT CATTACCGGG GAGAAAAGCG TGCTGGATTA CCTGCTAAAA
CCGGTGCTCA AGGCCCGGAC CGAGGCGATG CGCGAGCGCT AG
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| Protein sequence | MSASSSSKPR GYFDSFGKSA EAEFMPETAG ASLQDSPRWS RITVWLAAAL LISALVWAKF
AVLQEVTMGE GKAIPSSKVQ VIQNLEGGIV TEIFVREGQM VDKGDKLLRL DDTRFLSNKG
ESEADRYALT AQVERLSAEA EGRPFKLSDE VIAKAPQVAE DERSLYEQRQ RRLASEQRTL
SEQLRQKTQE LAEFRSKQGQ YSSSLALVNQ EMNMSEPLVK TGAVSPVEIL RLKRSAVEIR
GSLNATTLAI PRAESAIAEI RSKIDESEQT FRSEAAKELN EKRTDLSKIT ASSIAIDDRV
SRTTVTSPVH GVIKQMKVNT IGGVVQPGSD MVEIVPLEDN LLIEAKVRPQ DVAFLHPGQK
AMVKFSAYDY TIYGGLSAKL ELIGADTITD DKGNSFYLIQ VRTDKNHLGG DVKPLLIIPG
MVATVDIITG EKSVLDYLLK PVLKARTEAM RER
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