Gene Pfl01_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1454 
Symbol 
ID3717132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1625040 
End bp1626419 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content62% 
IMG OID 
ProductNa+/solute symporter 
Protein accessionYP_347186 
Protein GI77457681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0563954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGG ATTTATTCGT CGTCCTCATC TACGCCGCCG GCATGCTCTT GCTCGGCTAC 
TTCGGCATGC GCAAGGCCAA GACCAACGAG GACTTCCTGG TCGCCGGGCG TAACCTCGGC
CCTAGCCTGT ACATGGGCAC CATGGCTGCG ACCGTTCTCG GTGGCGCGTC CACCGTCGGC
ACCGTGCGTC TGGGCTACGT GCATGGCATC TCCGGTTTCT GGCTGTGCGC GGCACTGGGT
TGCGGCATCG TGGCGCTGAA CCTGTTCCTG GCCAAGCCGC TGCTGAAACT GAAGATCTAC
ACCGTTACCC AGGTCCTGGA AAAACGCTAC AACCCGATGG CCCGCTCGGC GAGCGCGGCG
ATCATGCTGG CCTACGCGCT GATGATCGGC GTGACCTCGA TCCTCGCCAT CGGCACCGTT
CTTCAGGTTC TTTTCGGCCT GCCGTTCTGG ATCTCGGTAC TGCTCGGCGG TGGCGTGGTC
GTGGTGTATT CGGCCATCGG CGGCATGTGG TCGCTGACCC TGACCGACAT CGTCCAGTTC
ATCATCAAGA CCGTCGGCCT GATGTTCATC CTGTTGCCAA TCTGCCTGTA CCGCGTCGGC
GGCTGGGATG AACTGGTGCT GAAACTGCCG GCCACCGCCT TCAGCTTCAC CACCATCGGC
TGGGACACGA TCATCACCTA CTTCATGATC TACTTCTTCG GCATCCTGAT CGGTCAGGAC
ATCTGGCAAC GGGTGTTCAC CGTCAAGAAC GAAAAAGTCG CTCAGTACGC CGGTAGCTTC
GCGGGCATCT ACTGCATCCT TTACGGTCTG GCCTGTGCCC TGATCGGCAT GGCAGCGCAC
GTTCTGATCC CGGATCTGGA CAACGTCAAC AACGCCTTCG CCGCGATCGT CAAACTGTCG
CTGCCGGACG GCATCCGTGG TCTGGTGATC GCCGCTGCCC TGGCCGCGAT GATGTCCACC
GCCAGCGCCG GCCTGCTCGC CGCCGCCACC ACCCTGACCG AAGACCTGCT GCCGAAACTG
CGCGGCGGCA AACAGTCGAG CCTGGGGGTG AACCGTCTGT TCACCCTGCT GACCGGTGTG
GTGGTGCTGG GCATCGCGCT GGTGGTCAAC GACGTGATCA GCGCCCTGAC CCTCGCTTAC
AACCTGCTGG TGGGCGGCAT GCTGATACCG CTGATCGGGG CGATCTTCTG GAAACGCGCG
ACCACCGCCG GCGCCATCGC CAGCATGGGC CTGGGTTTCG CCACCGCCCT GCTGTTCATG
TTCAAGGACG GTCTGGATGC CAACACCCCG ATCTACTACA GCCTGGCTGT GGGTCTGGTG
AGTTTTGTGG TGGTCAGCCT GATGTCGCGT CGCCCAAACG TGGTGGCCAG CGCGATCTAA
 
Protein sequence
MALDLFVVLI YAAGMLLLGY FGMRKAKTNE DFLVAGRNLG PSLYMGTMAA TVLGGASTVG 
TVRLGYVHGI SGFWLCAALG CGIVALNLFL AKPLLKLKIY TVTQVLEKRY NPMARSASAA
IMLAYALMIG VTSILAIGTV LQVLFGLPFW ISVLLGGGVV VVYSAIGGMW SLTLTDIVQF
IIKTVGLMFI LLPICLYRVG GWDELVLKLP ATAFSFTTIG WDTIITYFMI YFFGILIGQD
IWQRVFTVKN EKVAQYAGSF AGIYCILYGL ACALIGMAAH VLIPDLDNVN NAFAAIVKLS
LPDGIRGLVI AAALAAMMST ASAGLLAAAT TLTEDLLPKL RGGKQSSLGV NRLFTLLTGV
VVLGIALVVN DVISALTLAY NLLVGGMLIP LIGAIFWKRA TTAGAIASMG LGFATALLFM
FKDGLDANTP IYYSLAVGLV SFVVVSLMSR RPNVVASAI